| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3513 |
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| Symbol | |
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| ID | 3758492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3472478 |
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| End bp | 3474904 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637784427 |
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| Product | formate dehydrogenase alpha subunit |
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| Protein accession | YP_390001 |
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| Protein GI | 78358552 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACC ATTGGATCGA CATCAAGAAT GCCGATGCAA TTCTTATTAT GGGCAGCAAT
GCTGCCGAAC ACCACCCCAT CTCGTTCAAA TGGGTGCTGC AGGCCAAAGA CAAGGGCGCC
GTGGTAATGC ACGTCGATCC CAAGTTTTCG CGCACATCCG CACGCGCGGA CTTTCATGTA
CCGCTGCGTT CGGGCACCGA CATCGCCTTT ATGGGCGGGA TGATACACTA CATTCTGGAA
ACGGAAAGCT ACTTCCGGCA GTACGTGCTT GATTATACCA ACGCATCGTT CATCGTGGGC
GAATCGTACG GGTTCAAGGA CGGACTGTTC AGCGGGTACG ATATACACAC CCGCAGCTAC
GACCGCAGCA AGTGGAACTT TGAAACCGAC GCGCAGGGCA CGCCCAAACG CGACCCCTCG
CTCAAGCACC CGCGCTGCGT CTTCCGCCTG ATGCAGGAAC ATTATTCACG CTATACGCTG
GACAATGTTT CATCTGTAAC CGGTGTGACA AAGGAAAACC TGCTGAAGGT CTACAAAGCC
TTTGCCGCCA CCGGCAAACC GGACAAAGCA GGCACCATGA TGTACGCCCT CGGCTGGACA
CAGCACACGG TGGGCGTGCA GAACATCCGC AGCGCCGCCA TTGTGCAGCT GCTGCTGGGC
AACATAGGTG TGGCGGGCGG CGGCATCAAC GCCCTGCGCG GCGAACCCAA CGTGCAGGGT
TCCACCGACC ACTGCCTGCT CTATCACATC ATTCCGGGCT ACATGACCAT GCCCATGGCC
GACTGGCAGA CCTATGCCGA TTACAACAAG GCCAACACGC CTGTTTCCGC AGACCCGCAG
AGCGCCAACT GGTGGCAGCA CAAGCCCAAG TACCTGACCA GCCTGCTCAA GGCATGGTTC
GGCGATGCGG CCACGGCGGA AAACGGCTAC TGCTACGGGC TGCTGCCCAA AATAGAAAAA
GGCGCCGACC ACTCCTACAT GTTCCTGTTT GACAGGATGT ACAGCGGCAA GATCACAGGC
GGCTTCATCA TCGGGCTGAA CCCCATGAAC AGCGTGCCCA ACACCAACAA GGTCCGCAAG
GCGCTGGACA ACCTCGACTG GCTGGTCACC GCGGAACTGC ACCATTCCGA AACCACGGAT
AACTGGCGCA GACCCGGTGT AGACCCGGCA ACTGTCAAAA CCGAGGTGTT TCTGCTGCCT
TCCGCCCACC GTGTTGAAAA GGCAGGCTCG GTGAGCAACA GCGGGCGCTG GCTTGTGTGG
CACCACAAGG CCGTGGAACC CGAAGGCGAA GCCCGCAGCT TCGGCGACAT GTTCGTACCG
CTTATAAACG TGGTACGCGA CCTGTACCGC AAAGAAGGCG GCACCATGCC TGAAGCCGTG
CTTAACCTCG ACTGGCCGCA GCAGTACGAC CCCGAGGAAT GGGCACGCCG CATCAACGGG
TTCTTCCTCA AGGACACCAC GGTAAACGGC AAAGAGTACA AAAAAGGGCA GCTGGTGCCC
TCCTTCACGG CGCTTGCCGA TGACGGCAGC ACCTCTTCGC TCAACTGGCT GTACTCGGGC
AGCTACACGG AAGAAGACGG CAACAAGGCT CAGCGGCGGG ACCCCTCGCA GACCCCCATG
CAGGCCGCCA TCGGCCTGTA CCCCAAGTGG TCGTGGTGCT GGCCTGTCAA CCGCCGTATT
CTGTACAACC GTGCGTCCGT GGACGCTCAG GGCAAACCGT GGAACCCTGC CAAGGCTGTC
ATCAGCTGGA ACGGCAAAAA ATGGGAAGGC GATGTCCCCG ACGGCGGCTG GCCGCCCATG
GCCACCGGCA AGGGCAGACA TCCGTTCATC ATGAGCAAGC ACGGCTTCGG CCAGCTGTAC
GGCACCGGCC GCATGGACGG GCCGTTCTCG GAACACTACG AGCCGGTGGA AACCCCCATC
GACGCGCATC CGTTCTCCAA ACAGCTGAGC AGCCCCGTGT ACAAGTTCGT TTCGAGCGAC
ATGGATAAAC TGGCCAGACC GGCCGACCCG CGCTTCCCCT ATGTGCTGAC CACCTACAAC
GTGACGGAAC ACTGGTGCGG CGGCGGCGAA ACCCGTAACG TGCCCAACCT GCTTGAGGCC
GAACCGCAGC TGTATGTGGA ATTAAGCCCC GAGCTGGCAG AAGAAAAAGG CATCGCCAAC
GGCGACGGAG TGATTCTGGA AAGTGCCCGC GGAAGGGTAG AGGCTATCGC CATGGTGACG
GTGCGCATAC GCCCCTTCAC CGTTCAGGGA AAAACGGTAC ACCTTGTGGG GATGCCGTTC
TGCTTCGGCT GGACGACACC CGGCACGGGC GACTCGACCA ACAGGCTTAC GCCTTCGGTC
GGCGACCCCA ACACATCCAT ACCGGAATAC AAGGCCAGCT GCGTCAATAT ACGCAAGGCC
GACACCCTGA CCGAAATCGA CCGATAG
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| Protein sequence | MTNHWIDIKN ADAILIMGSN AAEHHPISFK WVLQAKDKGA VVMHVDPKFS RTSARADFHV
PLRSGTDIAF MGGMIHYILE TESYFRQYVL DYTNASFIVG ESYGFKDGLF SGYDIHTRSY
DRSKWNFETD AQGTPKRDPS LKHPRCVFRL MQEHYSRYTL DNVSSVTGVT KENLLKVYKA
FAATGKPDKA GTMMYALGWT QHTVGVQNIR SAAIVQLLLG NIGVAGGGIN ALRGEPNVQG
STDHCLLYHI IPGYMTMPMA DWQTYADYNK ANTPVSADPQ SANWWQHKPK YLTSLLKAWF
GDAATAENGY CYGLLPKIEK GADHSYMFLF DRMYSGKITG GFIIGLNPMN SVPNTNKVRK
ALDNLDWLVT AELHHSETTD NWRRPGVDPA TVKTEVFLLP SAHRVEKAGS VSNSGRWLVW
HHKAVEPEGE ARSFGDMFVP LINVVRDLYR KEGGTMPEAV LNLDWPQQYD PEEWARRING
FFLKDTTVNG KEYKKGQLVP SFTALADDGS TSSLNWLYSG SYTEEDGNKA QRRDPSQTPM
QAAIGLYPKW SWCWPVNRRI LYNRASVDAQ GKPWNPAKAV ISWNGKKWEG DVPDGGWPPM
ATGKGRHPFI MSKHGFGQLY GTGRMDGPFS EHYEPVETPI DAHPFSKQLS SPVYKFVSSD
MDKLARPADP RFPYVLTTYN VTEHWCGGGE TRNVPNLLEA EPQLYVELSP ELAEEKGIAN
GDGVILESAR GRVEAIAMVT VRIRPFTVQG KTVHLVGMPF CFGWTTPGTG DSTNRLTPSV
GDPNTSIPEY KASCVNIRKA DTLTEIDR
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