| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3494 |
|---|
| Symbol | |
|---|
| ID | 3758472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3453931 |
|---|
| End bp | 3454971 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637784407 |
|---|
| Product | DHH family protein |
|---|
| Protein accession | YP_389982 |
|---|
| Protein GI | 78358533 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0618] Exopolyphosphatase-related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTATT TTCGCAAGCT TGAACCGGGG CTTTCACAAC TTCTCGAACT TTTTTCGCGC
GATGAGCGCT GGCTTATTGT CATCAACGCC GATCCCGACG CCATGGCATC GGCCATGGCT
CTGCGCCGCA TCATGATTCA CAGGGTGTCC GACGTGGGCA TAGCCCATGT GAACACCATA
TCACGGCCCG ACAATCTGGC CATGGTGCGC TATCTGCACA TTCCCATGGT CAAGTTCACC
CCCACCGTGG CGGCGCAGTA TGACCGGTTC GCCATGGTCG ATTCTCAGCC CCATCATCAT
CCGGGGTTTT CCGGTGTGCA TTATTCCGTG GTGTTCGACC ACCATCCCCT GAGCGAAGAG
GAACCCGTCA TTGCCGACTT CAAGGACCTG AAGCCGGAAT ACGGCACCTG TTCGGCACTG
ATGACCGAGT ATCTGTACAA TCTCAAGATA CGCCCCGGAA AGCTGCTTGC CACCGCGCTG
CTTTTCGGCA TCAAGACGGA TACAAACAGC TTCGAACGCG AATCCTGCGA CATCGATATC
CGCGCATTCC GGTATCTTTC CAAGTTTGCC AACCATCAGC TGCTCTCGCG CATCGCCCGC
AGCGAATTTC GGCTGGAGTG GCTGGATTAT TTTTCACGCG CGTTCACCAG CCTGCACACT
GTGCGTTCCG GGCGATACGT GTATGTGGGC GAGGTGGACA ACCCCGATGT GCTTGTGGTT
ATTGCCGACT TTTTTACGCG GGTGCACGAA ATCCGCTGGG CCGTGGTGGC CGGGGTGTAC
AAGGATACGC TGGTCATTAT TTTCCGCGGC GACGGTGTGG TGCGCAATCT GGGCAATTTT
GCCAAGCTGC AGTTCGGCGA TATCGGCTCT GCGGGGGGGC ACAAGACCAT GGCCCGCGCC
GAGGTGCCTT TGCAGCGTCT GGAGGGCAAG GATGTGGAAA TGTTTGTTTT CAAGCGTCTG
GTAAGCCCCC CGAAGCGCGT CCGCCCCAGA GAGGAAGAGC GTCAGGCTGA TGCCGCAGGC
AACGACAGGA AAAAAGAATG A
|
|---|
| Protein sequence | MSYFRKLEPG LSQLLELFSR DERWLIVINA DPDAMASAMA LRRIMIHRVS DVGIAHVNTI
SRPDNLAMVR YLHIPMVKFT PTVAAQYDRF AMVDSQPHHH PGFSGVHYSV VFDHHPLSEE
EPVIADFKDL KPEYGTCSAL MTEYLYNLKI RPGKLLATAL LFGIKTDTNS FERESCDIDI
RAFRYLSKFA NHQLLSRIAR SEFRLEWLDY FSRAFTSLHT VRSGRYVYVG EVDNPDVLVV
IADFFTRVHE IRWAVVAGVY KDTLVIIFRG DGVVRNLGNF AKLQFGDIGS AGGHKTMARA
EVPLQRLEGK DVEMFVFKRL VSPPKRVRPR EEERQADAAG NDRKKE
|
|---|
| |