| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3492 |
|---|
| Symbol | |
|---|
| ID | 3758470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 3452034 |
|---|
| End bp | 3453419 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637784405 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_389980 |
|---|
| Protein GI | 78358531 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCAC CCGTATCGTC ACCCCGCCAT CCGGCAAAAC GTTTTGCCCG CACGGCGGCT
CTCTGGCTGG TTGTGGCAAC TCTGCTCCAC GCTTCACCCG CACTGGCGGA AGATGCTCCG
GCAATGCTCA GCCAGCAGCA TGGCAACATC CTCTGGACGC TCATCGCCGC CATTCTGGTC
ATGCTCATGC AGGCCGGATT TGCCATGGTG GAATGCGGAT TCACCCGTGC CAAAAACGCG
GGCAACATCC TCATGAAAAA CTTTGTGGAC TTTGCGGCGG GTTCACTGGT GTTCTTTCTG
GTCGGCTATG CCTTCATGTT CGGCGCCGAC GCAGGCGGTT TCATCGGCAC ATCGGGATTT
GCCCTTGCCC ATGTGGACCC CGCCACAGAA GGCGGCATGT GGGATCTGAC CTTCTGGTTC
TTCCAGTCGG TGTTCGCGGC CACGGCGGCC ACCATCGTAT CCGGCGGCAT TGCCGAACGC
ACCAGATTTG CCAGCTACAT CATTGTCTCC GTACTGGTGA CAGGCATCAT CTACCCCGTA
TCGGGCCACT GGGCATGGGG CGGACTGGCC GGAAACGCCG GATGGCTTGA AGGGCTGGGC
TTTGCCGACT TCGCAGGATC GACGGTTGTC CATTCCGTGG GCGGCTGGGT TGCCCTTGCC
GGGGCCATCG TGGTGGGTCC CCGTGCGGGC AAATACGGAC CCGACGGCTC CGTGCGGGCC
ATACCGGGCC ACAACATTCC GCTGGCGGCT CTGGGTGTGT TCATACTGTG GTTCGGCTGG
TTCGGGTTCA ACCCCGGCTC CACCACCACC GCAGACGGCA CCATAGGCTA TATCGCCGTG
AACACCAGTC TGGCAGCCTG TGCCGGTACC GTTACCGCCA TGCTCACCGC ATGGATACGG
TTCGGCAAAC CCGATGCATC CATAACCATG AACGGCGCTC TGGCAGGTCT GGTGGGCATC
ACGGCAGGCT GTTACGAGCT TTCCCCTTCC GGCGCCATCA TCGTGGGGAT CATCTGCGGC
TTTGTGGTCG TGCTCTCCAT TGAGTTTCTG GACAAGATTC TGAAGATCGA CGACCCCGTG
GGCGCGGTTT CCGTGCACGG CGTGTGCGGC GCCATAGGTA CGCTGATGGT GGGGCTGCTG
GCGCATCCCT CTTACGGCGG ATCCACAGGC CTTGTATACG GCGGCGATGC TTCTCTGCTC
ATGGTACAGG CTCTCGGTGT GGCGGTGGTA TTCGCCTGGG CCTTCGGCAT GGGGCTGGTG
GTGTTCCGCA TTGTGGCCGC AGTGGCGGGC CTGCGTGTCT CTCCCGAAGA AGAGCTCAAA
GGTCTGGATA TCACGGAACA CGGTTCCGAA TCGTACAACG GATTTCAGAT TTTCACCGTG
GAATAG
|
|---|
| Protein sequence | MHAPVSSPRH PAKRFARTAA LWLVVATLLH ASPALAEDAP AMLSQQHGNI LWTLIAAILV
MLMQAGFAMV ECGFTRAKNA GNILMKNFVD FAAGSLVFFL VGYAFMFGAD AGGFIGTSGF
ALAHVDPATE GGMWDLTFWF FQSVFAATAA TIVSGGIAER TRFASYIIVS VLVTGIIYPV
SGHWAWGGLA GNAGWLEGLG FADFAGSTVV HSVGGWVALA GAIVVGPRAG KYGPDGSVRA
IPGHNIPLAA LGVFILWFGW FGFNPGSTTT ADGTIGYIAV NTSLAACAGT VTAMLTAWIR
FGKPDASITM NGALAGLVGI TAGCYELSPS GAIIVGIICG FVVVLSIEFL DKILKIDDPV
GAVSVHGVCG AIGTLMVGLL AHPSYGGSTG LVYGGDASLL MVQALGVAVV FAWAFGMGLV
VFRIVAAVAG LRVSPEEELK GLDITEHGSE SYNGFQIFTV E
|
|---|
| |