| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3470 |
|---|
| Symbol | |
|---|
| ID | 3758448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 3431290 |
|---|
| End bp | 3432207 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637784383 |
|---|
| Product | 6-phosphogluconate dehydrogenase-like protein |
|---|
| Protein accession | YP_389958 |
|---|
| Protein GI | 78358509 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAG CCATCATAGG ACTGGGCAGA ATGGGCATGA ACATGGCCCG GCGCCTGCTG
CGCGGAGGAC ACGAGGTTGC CGTATGGAAC CGCAGCCCTG CCAAAACACA GGTAATGGAG
GCCGAAGGTG CCGCCGGATT CACCAGCCTG CAGGCACTGG CCGCCAGTCT TGCCCCGCCG
CGTACGCTGT GGTTCATGCT GCCCGCCGGA GAGGCCACGC AACAGCGCAT GGACGAAGTA
CTGCCGTTTC TGCAGCCCGG CGATGTGGTA GTGGACGGTG CCAATGCCTA CTGGAAGGAC
GACCGGCCCC GTGCCGACAG GCTGGCCGCA CACGGCATAC GGTATGTGGA CGCAGGAGTT
TCCGGCGGCA TATGGGGACT GGAAAACGGA TACTGCACCA TGCTGGGGGG TGAAGCGGCT
GATATCCGGC ATCTGGCGCC GGTACTGGAT ACGCTGGCCC CGCCGCAGGG CTGGATGCAT
TGCGGCCCGG CCGGAGCCGG ACACTTTGTC AAAATGGTCC ATAACGGCAT TGAATACGCC
ATGATGGAGT CATACGGCGA AGGGTTTGAC CTGCTGCGCA ACGGCCCGTT CAGCGGGCTG
GACCTGCAGG GTATCGCCGC CCTGTGGAAC AGGGGCAGCG TGGTACGCTC GTGGCTGCTG
GAACTGCTGG ATGCGGCGCT GAAAAAAGAC CCCGGCCTTG CATCGCTGAA AGGATATGTG
GACGATTCCG GCGAGGGACG CTGGACAGTA ACCGATGCCG TGGACCATGC GGTGCCGGTG
CCGGTACTGG CACAGGCGCT GTTCCGGCGG TTCGAATCAC GGCAGGACGA TCTGTTTTCC
AACAAGGTGC TGGCCGCCCT GCGCAACGAA TTCGGCGGGC ATGCGGTAAA AAACACTGAC
GAAGGGGATG CCTCATGA
|
|---|
| Protein sequence | MQIAIIGLGR MGMNMARRLL RGGHEVAVWN RSPAKTQVME AEGAAGFTSL QALAASLAPP
RTLWFMLPAG EATQQRMDEV LPFLQPGDVV VDGANAYWKD DRPRADRLAA HGIRYVDAGV
SGGIWGLENG YCTMLGGEAA DIRHLAPVLD TLAPPQGWMH CGPAGAGHFV KMVHNGIEYA
MMESYGEGFD LLRNGPFSGL DLQGIAALWN RGSVVRSWLL ELLDAALKKD PGLASLKGYV
DDSGEGRWTV TDAVDHAVPV PVLAQALFRR FESRQDDLFS NKVLAALRNE FGGHAVKNTD
EGDAS
|
|---|
| |