Gene Dde_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3459 
Symbol 
ID3758437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp3420694 
End bp3421200 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content62% 
IMG OID637784372 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_389947 
Protein GI78358498 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAGG TCGGCATTTT CATCGGAAGC ATCTCTGACG AGGAAACCCT GCGCCCCTGC 
ACCGAGGTGC TGGACAAGCT GGGCATCAGC TATCTGTTTA CTGTCAGTTC CGCGCACCGT 
ACCCCTGAAC GCACGGAATC GCTGGTGGAT ACGCTGGAAA AAGACGGCTG TCAGGTCTTT 
ATCTGTGCCG CAGGCATGGC CGCCCATCTG GCGGGCGCCG TGGCCGCACG CACTCTGCGC 
CCTGTCATCG GGGTACCTGT CACCGCCTCA AAACTGGGCG GCATGGATGC GCTGCTGGCA 
ACGGTGCAGA TGCCTCCCGG ATATCCGGTG GGCACCGTGG CACTGGACAA GGCAGGCGCC 
AAAAACGCAG GCTGGTTTGC CGCGCAGATA ATCGCCCTGA ACAACCCGGA ACTGGCACAG 
CGCCTTGCCG CGGCACGCAA GGAGTTCACC GCCGAGGTGA TACGCGCCGG AGAAGATCTG 
GAACGCCGTA TGGCACAGGG CAGATAA
 
Protein sequence
MPQVGIFIGS ISDEETLRPC TEVLDKLGIS YLFTVSSAHR TPERTESLVD TLEKDGCQVF 
ICAAGMAAHL AGAVAARTLR PVIGVPVTAS KLGGMDALLA TVQMPPGYPV GTVALDKAGA 
KNAGWFAAQI IALNNPELAQ RLAAARKEFT AEVIRAGEDL ERRMAQGR