Gene Dde_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3452 
Symbol 
ID3758430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3413313 
End bp3414488 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content63% 
IMG OID637784365 
Productaminotransferase, class V 
Protein accessionYP_389940 
Protein GI78358491 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACA AGCCCAGAAT GCTCACCCCC GGCCCCACGC CCATACCCGC CGCAGTGCGG 
CTGGCCATGG CGCAGGACAT GATCCACCAC CGCAAACCCG CGTTCAAAGC CGTCATGGCC
GAAACCCAGC GGTTGCTCAG ACCGCTTTTC GGCACTGCGC AGCCCGTACT GCCGCTGTCA
TGTTCCGGCA CGGGCGCCAT GACTGCCGCG GTCACCAACC TGTTTTCCGC CGGTGAAAAG
GTGGTGGTGG TGGAAGGCGG CAAATTCGGC CAGCGCTGGA CAGAAATTGC CCGCTCGCAC
GGTCTTGTAC CCGTGGTCAT CGAGGTGCCC TGGGGCAGCG CGGTAACCGC GCAGGCCGTC
AAACAGACGC TGGAACAGCA CGGCGATGCG GCGGGTGTGC TGGTGCAGTG CTCGGAAACA
TCCACCGGTG TCATGCATCC CGTCCGCGAG ATAGCCGCCG TCACGCGCTC CGCCGAAACA
CTGCTGGTGG TGGACGGCAT TTCCTCGGTG GGACTTTCGC CCTGTCCCAT GGACGAATGG
GGAGTTGACT GTCTGCTCAC CGGCTCGCAA AAAGGACTGA TGCTGCCCCC CGGTCTGGCG
CTCATCGCCC TGTCCGAGCG GGCCTGGGCC CGTACCGCCA CGGTGACGCC CTCATGCTTT
TACTTCAACC TGCGGGCTGA ACGTAAAAAT GCCGAAGCCG ACCAGACGCT GTTCACAACG
CCTGTCAGCC TGATAATCGG ACTGCGCGAA AGTCTGCGCA TGTACGAAGA AACAGGGCTG
GAAGAGGTTT TCCGCAAGCA GTGGGCGCTC ACACAGATGG TGCGCACCGG TGTAAGCGCC
ATGGGGCTTG CTCCCTTTGT GGCCGCGGAC TACGGCTGGG GGCTGACCAG CATAGCACTG
CCCGGAGGAA TCGACGGCAC TGCGGTGCTG GCCCATGCCG CGCAGCATTA CGGCGTTATC
ATGGCCGGAG GACAGGACCA CCTGAAGGGC CGTATCATAC GCATGGGACA CATGGGCTGG
GTGGACTGGG GCGACATAGC CGCCGGCCTG CACGCACTGG CAGAAAGCTA CCGCGCCTGC
GGGGGCTACA TAGGCTGCCG CGATTATATC GAACAGGCCT TGCAAGCCTA CAACGAGGCA
TTACTCTCCT ACGCAGAGAA CAACCCGTTC GCCTGA
 
Protein sequence
MLNKPRMLTP GPTPIPAAVR LAMAQDMIHH RKPAFKAVMA ETQRLLRPLF GTAQPVLPLS 
CSGTGAMTAA VTNLFSAGEK VVVVEGGKFG QRWTEIARSH GLVPVVIEVP WGSAVTAQAV
KQTLEQHGDA AGVLVQCSET STGVMHPVRE IAAVTRSAET LLVVDGISSV GLSPCPMDEW
GVDCLLTGSQ KGLMLPPGLA LIALSERAWA RTATVTPSCF YFNLRAERKN AEADQTLFTT
PVSLIIGLRE SLRMYEETGL EEVFRKQWAL TQMVRTGVSA MGLAPFVAAD YGWGLTSIAL
PGGIDGTAVL AHAAQHYGVI MAGGQDHLKG RIIRMGHMGW VDWGDIAAGL HALAESYRAC
GGYIGCRDYI EQALQAYNEA LLSYAENNPF A