| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3447 |
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| Symbol | |
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| ID | 3758425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3405581 |
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| End bp | 3408031 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637784360 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | YP_389935 |
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| Protein GI | 78358486 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.597927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCTG CAGCACCCGC AATATCTCAA ACTTTCCGGA ATATTACAGC CCTATTGATC
ACCTTTGCCG CCGTGGTGCT GCTGCACGTC AGCGCCGCAC AGGCAGAACA GTCACCGGAA
GAGATTGAAA ACAGTGAAAT ACTGCACCTT GTCGAGATAA AACAACGCGA GCTGAACCTG
CTGGAACAGT CGGACCTGAA GCTGCAGGAA GCAATGAAAG GCGCGCTGAA ATCGGCATCG
GAAACATACG AAAAAGCGTT GCGCGACTAT GAGGAAGCCC AGCTTACGCA CGGGCTTTCC
GGCGGCACCC CCATGCTTAC CCGGTCATCC GTACAGCGGT TGAACGCATT ATACAACGAT
CTGGAAACAG CACAGGAGTC TCTTTCCAAT GTGCGCGATC AGGCGCGGGT ACGTCTGGAA
AGAATAGGCG CTGTTGATGT GGCCCCGCTG CTCAAATCCC GTGACATTTC AGCGGCTACG
CGCAATCTGG TAGACGCCTA CCTGCGCGAT CTGCGCAACA TCCAAAGCAG GCTGGAGACA
CAGGAGGCCC GTGCCGCCAA GCTGGAAAGC AGGCTGGGCA AGCTGCGGCA AAACGTACAG
GAAAGACGCC TGCAACGCGA AGAAGAGCTG GTTTCAAGCT GGCGGGATTT CTTTTTCCGC
AACAAAGATC CGCTTCTTTC CGTGGAGCTG TGGCGGCAAT CCGATTCCGT GGCGTTATGG
GCATCCATGC TGATGACCGG CATGACGCGT GAACTGGGCA TGCTGAGCAG CAACGCTTTT
TCTGCGGTGC TGTTTGCGCT GGGCATCATA GGTCTGCTTG CGCTGGGCGG CGTGCCTGTC
ATCAGGTCGG CTACACGGGG TACCCCCGGC GCCACCCCGC AGGCCGTGCG GGCGCTGCAC
ACCAGCTGCC TCATAGGCAG TATCGGTCTG GCCGTGGTCA TAGCATCGTC GCGCATGTTT
GCCGGAGCGG CCATATATAC CAGCGTAGCC GGTATGGTGA TGCTCGGCTT TGCCACCATT
CGGGCTTCGG CCATTTTGCG GCGCATGATC AATACCGGAT TCATACGGCT GTCACACAGC
CCTGCGGCGG TGATGTTTCT GTGCAGCAGC CTGATTGTGG TCAGCGAGAT GCCCGCCAAG
CTGGCGGTAC CGCTATGGGC CCTGCTGCTG GTTCTGTACG GGTTCTACAT GAGCCTGCGC
GACAGGCGGC GCGGTATTCA CGGCAGCATA GCCAAAAGAT CATGGTTCTG GCTGTGCGCA
CTGCTGCTCA TAGTGGCCGT GGCAGGCTAC GGCGTATTCT CCGCCTTTCT TTTTATGGTG
TGGTTTGTTC TGTACGCGGC ATACAGCGCC AGCATCGCGC TCACGGAACT CATCCACCTG
CGCGGTGCCG CAAGCACGGC TGATTCCACG GCACTGGTCA TGGGCAAAGG GGTTCTTGTG
GGCATTGCCT CTCCGGGGGT GTGGCTGATG AGCTTCGGCG CCGGTCTTCT CTGGCTGTAC
GGCTTTGTCG GTCAGGGGGT GTTTGCCAGC ATTGCCAATC TTGAACTGAG CTGGGAAGGT
TTTTCACTCA AGCTGGCCAG CCTGCTGTTG CTGGCTGCTC TTTTTTACAT CACGCGTGCC
TGCACCACAC TGGCGCGCGG CGCACTGGCA CGCATGTCGC TGCACTGGCC CAGAGGCCAG
CGGGGCGCTG TACTTTCACT GCAGACCACC GCCACATATG CACTCTGGGG CCTGTATGCG
CTTATCGCGC TGCATATTCT GGGGGTAAGC CTGACCAGCC TCACGGTCAT TGCCGGTGGC
CTCAGCGTCG GTCTGGGGTT CGGCATGCAG ACCATTTTCA ACAACTTCAT GAGCGGTCTC
ATCCTGCTGT TCGGACGGTC CATACAGCAG GGAGACATTA TACAAGTGGG CGAACTGTGG
TGCACAGTCA AAAACGTGAC CATACGCACC ACCATTGTGG AAACATTCGA CAGCGCCACC
ATTCTCATCC CCAACTCGGA CCTTGTGACC ACACAGGTCA CCAACTGGAC AAAAAACAAC
ACAACCATCC GGCGCGACAT CCTTGTGGGA GTGGCCTACG GTTCTGATAC GCGCAAAGTG
GAAAAAACCC TGCTGGCACT GGCCAAGGCG CACCCCAATG TCATGCGCCG TCCGGAACCG
CAGGTCATTT TCAGCAACTT CGGCGCCAGC TCGCTGGATT TCTTCCTGCG CATCTGGATA
GATGACATCG ACAACATGCT CACCACGGCA TCATCGCTGC GCTTTGCCAT TGATGAAGAG
TTCCGCAAAG AAGAAATAGA AATAGCCTTT CCGCAAATGG ACCTGCACCT GCGCAGCCTG
CCCCCCTCGT GGCAGGTACA ACCATCTGCG TCCGTCCGGC AGAAACACAA CAGCACTGAA
GCGGAAGACA ACATACCGTC TGCGCAGTCC GGCAACGACG CCCCGGCATA G
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| Protein sequence | MTPAAPAISQ TFRNITALLI TFAAVVLLHV SAAQAEQSPE EIENSEILHL VEIKQRELNL
LEQSDLKLQE AMKGALKSAS ETYEKALRDY EEAQLTHGLS GGTPMLTRSS VQRLNALYND
LETAQESLSN VRDQARVRLE RIGAVDVAPL LKSRDISAAT RNLVDAYLRD LRNIQSRLET
QEARAAKLES RLGKLRQNVQ ERRLQREEEL VSSWRDFFFR NKDPLLSVEL WRQSDSVALW
ASMLMTGMTR ELGMLSSNAF SAVLFALGII GLLALGGVPV IRSATRGTPG ATPQAVRALH
TSCLIGSIGL AVVIASSRMF AGAAIYTSVA GMVMLGFATI RASAILRRMI NTGFIRLSHS
PAAVMFLCSS LIVVSEMPAK LAVPLWALLL VLYGFYMSLR DRRRGIHGSI AKRSWFWLCA
LLLIVAVAGY GVFSAFLFMV WFVLYAAYSA SIALTELIHL RGAASTADST ALVMGKGVLV
GIASPGVWLM SFGAGLLWLY GFVGQGVFAS IANLELSWEG FSLKLASLLL LAALFYITRA
CTTLARGALA RMSLHWPRGQ RGAVLSLQTT ATYALWGLYA LIALHILGVS LTSLTVIAGG
LSVGLGFGMQ TIFNNFMSGL ILLFGRSIQQ GDIIQVGELW CTVKNVTIRT TIVETFDSAT
ILIPNSDLVT TQVTNWTKNN TTIRRDILVG VAYGSDTRKV EKTLLALAKA HPNVMRRPEP
QVIFSNFGAS SLDFFLRIWI DDIDNMLTTA SSLRFAIDEE FRKEEIEIAF PQMDLHLRSL
PPSWQVQPSA SVRQKHNSTE AEDNIPSAQS GNDAPA
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