Gene Dde_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3420 
Symbol 
ID3758397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3383048 
End bp3384199 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content65% 
IMG OID637784332 
ProductDegP2 peptidase 
Protein accessionYP_389908 
Protein GI78358459 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTACC CCGACCCGTA CGCGCGCCCG CCACAGGACC ACTTTATCCG TCGCTGGCTC 
TTCATCACCG CCTGCATTGC CGCGCTCATG CTGCTGTGGC AGTTTCTGCC CGCCATCGAG
GCCTGGTTCA GTCCGCGCGA GGCGGCAGAA CGCACCGTGA CGGCGCGTGG CGATCTGGCG
GCGGACGAGA AGGCCACCAT CGAACTGTTC GAAAAATCGC GCGCCTCGGT GGTGTATATC
ACCACCGCAC AGCTGGTACG AGACGTCTGG ACGCGCAATG TCTTCTCCGT GCCGCGCGGC
ACCGGCTCGG GCTTCATCTG GGACGACGCC GGCCACGTTG TCACCAACTT CCACGTCATC
CAGGGGGCGT CCGAAGCCTC CGTCAAACTC GCCGACGGCC GCGACTACCA AGCCGCGCTG
GTGGGGGCAA GCCCCGCGCA CGACATCGCT GTGCTCAAGA TCGGCGTCGG TTTCAAGCGC
CCGCCTGCCG TGCCGATCGG CACCAGCGCC GACCTCAAGG TGGGTCAAAA GGTCTTTGCC
ATCGGCAACC CCTTCGGCCT GGACTGGACG CTCACCGCCG GTATCGTCTC CGCGCTCGAC
CGCTCGTTAC CCGGAGAAGC GGGCGGCCCG GCCATCGATC ACCTGATCCA GACCGACGCC
GCCATCAACC CTGGCAACTC CGGTGGGCCG CTGCTCGATT CGGCAGGAAG GCTCATCGGC
ATCAACACGG CGATCTATAG CCCCTCCGGC GCCTCGGCCG GGATTGGTTT CGCCGTGCCG
GTGGACACCG TCATGCGCGT AGTCCCGCAA CTCATCAAGA CCGGTAAGTA CATCCGTCCG
GCGCTGGGCA TTCAGGTGGA CGAACAGCTC AATCAGCGCC TGCTGGCGCT GACTGGAAGC
AAGGGCGTGT TCGTGCTGCG TGTTACCCCT GGTTCGGCAG CGCACAAGGC CGGCCTCGCG
GGTGTCGAAG TCACGCCGCA AGGCATCGTG CCCGGCGACC GCATCATCGG TGTTGATGGC
AAGGCGACGG ACAATGTGGC TAAGCTGCTC GCGCGGCTAG ACGACAGGAA GGTCGGCGAT
GTGGTGGTCT TGTCAGTGGA ACGGGCCGGC AAAACGCGCG AAGTGCGTGT GGAGCTGCAA
CCGGGGATTT GA
 
Protein sequence
MAYPDPYARP PQDHFIRRWL FITACIAALM LLWQFLPAIE AWFSPREAAE RTVTARGDLA 
ADEKATIELF EKSRASVVYI TTAQLVRDVW TRNVFSVPRG TGSGFIWDDA GHVVTNFHVI
QGASEASVKL ADGRDYQAAL VGASPAHDIA VLKIGVGFKR PPAVPIGTSA DLKVGQKVFA
IGNPFGLDWT LTAGIVSALD RSLPGEAGGP AIDHLIQTDA AINPGNSGGP LLDSAGRLIG
INTAIYSPSG ASAGIGFAVP VDTVMRVVPQ LIKTGKYIRP ALGIQVDEQL NQRLLALTGS
KGVFVLRVTP GSAAHKAGLA GVEVTPQGIV PGDRIIGVDG KATDNVAKLL ARLDDRKVGD
VVVLSVERAG KTREVRVELQ PGI