Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3420 |
Symbol | |
ID | 3758397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3383048 |
End bp | 3384199 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637784332 |
Product | DegP2 peptidase |
Protein accession | YP_389908 |
Protein GI | 78358459 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTACC CCGACCCGTA CGCGCGCCCG CCACAGGACC ACTTTATCCG TCGCTGGCTC TTCATCACCG CCTGCATTGC CGCGCTCATG CTGCTGTGGC AGTTTCTGCC CGCCATCGAG GCCTGGTTCA GTCCGCGCGA GGCGGCAGAA CGCACCGTGA CGGCGCGTGG CGATCTGGCG GCGGACGAGA AGGCCACCAT CGAACTGTTC GAAAAATCGC GCGCCTCGGT GGTGTATATC ACCACCGCAC AGCTGGTACG AGACGTCTGG ACGCGCAATG TCTTCTCCGT GCCGCGCGGC ACCGGCTCGG GCTTCATCTG GGACGACGCC GGCCACGTTG TCACCAACTT CCACGTCATC CAGGGGGCGT CCGAAGCCTC CGTCAAACTC GCCGACGGCC GCGACTACCA AGCCGCGCTG GTGGGGGCAA GCCCCGCGCA CGACATCGCT GTGCTCAAGA TCGGCGTCGG TTTCAAGCGC CCGCCTGCCG TGCCGATCGG CACCAGCGCC GACCTCAAGG TGGGTCAAAA GGTCTTTGCC ATCGGCAACC CCTTCGGCCT GGACTGGACG CTCACCGCCG GTATCGTCTC CGCGCTCGAC CGCTCGTTAC CCGGAGAAGC GGGCGGCCCG GCCATCGATC ACCTGATCCA GACCGACGCC GCCATCAACC CTGGCAACTC CGGTGGGCCG CTGCTCGATT CGGCAGGAAG GCTCATCGGC ATCAACACGG CGATCTATAG CCCCTCCGGC GCCTCGGCCG GGATTGGTTT CGCCGTGCCG GTGGACACCG TCATGCGCGT AGTCCCGCAA CTCATCAAGA CCGGTAAGTA CATCCGTCCG GCGCTGGGCA TTCAGGTGGA CGAACAGCTC AATCAGCGCC TGCTGGCGCT GACTGGAAGC AAGGGCGTGT TCGTGCTGCG TGTTACCCCT GGTTCGGCAG CGCACAAGGC CGGCCTCGCG GGTGTCGAAG TCACGCCGCA AGGCATCGTG CCCGGCGACC GCATCATCGG TGTTGATGGC AAGGCGACGG ACAATGTGGC TAAGCTGCTC GCGCGGCTAG ACGACAGGAA GGTCGGCGAT GTGGTGGTCT TGTCAGTGGA ACGGGCCGGC AAAACGCGCG AAGTGCGTGT GGAGCTGCAA CCGGGGATTT GA
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Protein sequence | MAYPDPYARP PQDHFIRRWL FITACIAALM LLWQFLPAIE AWFSPREAAE RTVTARGDLA ADEKATIELF EKSRASVVYI TTAQLVRDVW TRNVFSVPRG TGSGFIWDDA GHVVTNFHVI QGASEASVKL ADGRDYQAAL VGASPAHDIA VLKIGVGFKR PPAVPIGTSA DLKVGQKVFA IGNPFGLDWT LTAGIVSALD RSLPGEAGGP AIDHLIQTDA AINPGNSGGP LLDSAGRLIG INTAIYSPSG ASAGIGFAVP VDTVMRVVPQ LIKTGKYIRP ALGIQVDEQL NQRLLALTGS KGVFVLRVTP GSAAHKAGLA GVEVTPQGIV PGDRIIGVDG KATDNVAKLL ARLDDRKVGD VVVLSVERAG KTREVRVELQ PGI
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