Gene Dde_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3406 
Symbol 
ID3758383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3368632 
End bp3369405 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID637784318 
Producttransposase/IS protein 
Protein accessionYP_389894 
Protein GI78358445 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAGCC TCCAGCACGA ACGAATGGTT TCGGTCTGTG AAAAGCTCAA GCTATGCGCT 
GTGCCGAACT GCTATGACCA GCTTGCGGAA GCGGCCGTCA GGCAGGAGAA GAGTTACATA
CAGTTTCTCG AAGAGGTCTT GCGGGCGGAA GAGGCCTTCC GCAAAGAGCG GAGCCGTGAA
GTAATGACGC GTATGGCGAA ATTCCCGGCA CCAAAGACCA TTGAGGGATA TGACTTTTCC
TTTGCCGCAG GGGCTCCGAA GAGACTGATC CAGGAGCTTG CCGGACTGAC CTTCCTGAAG
CGCAGGGAAA ACGTTCTGCT GCTTGGCCCC AGCGGGGTCG GCAAAACGCA TCTGGCAATT
GCTCTTGGCC TGCGTGCGGC TGAGGCCGGT CTCAAGGTCC GCTTCACGAC GGCGGCAGAC
CTCATTCTCC AGTTGGAGAC CGCGATCCGG CAAGGCCGCT ACGCACAGAC CATGAAACGC
TCCGTCAGCG GGCCGAGCCT GCTCATTGTG GATGAGGTCG GCTATCTCCC GATGACAGGC
GACCAGGCAA ACCTCTTCTT TCAGGTGGTG GCCAAGCGGT ACGAGTCAGG TTCAATCATA
CTGACTTCCA ACTTAAGCTT CGGCGAATGG GAGACCGTCT TTTCCGGAAA TACGGCCCTG
ACCTCAGCCA TGCTCGACCG GCTGCTGCAC CACTCCCATG TCATCCAGAT CAAGGGAGAC
AGCTACCGGC TGAAAGACAA AATCAAATCC GGCGTGTTCG GAAAAAACAA CTGA
 
Protein sequence
MDSLQHERMV SVCEKLKLCA VPNCYDQLAE AAVRQEKSYI QFLEEVLRAE EAFRKERSRE 
VMTRMAKFPA PKTIEGYDFS FAAGAPKRLI QELAGLTFLK RRENVLLLGP SGVGKTHLAI
ALGLRAAEAG LKVRFTTAAD LILQLETAIR QGRYAQTMKR SVSGPSLLIV DEVGYLPMTG
DQANLFFQVV AKRYESGSII LTSNLSFGEW ETVFSGNTAL TSAMLDRLLH HSHVIQIKGD
SYRLKDKIKS GVFGKNN