Gene Dde_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3404 
Symbol 
ID3758381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp3366806 
End bp3368296 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content46% 
IMG OID637784317 
Producthypothetical protein 
Protein accessionYP_389893 
Protein GI78358444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA AGCTCAGCCC ACGGGGCAGA CCCTTATACC TTGGCAGCCG CGGAAGGCAC 
ACCCGATTTT CCCGCATTGC GGACAGCGTA GCAGACTCGT TTAATCTGTC AAAAGAATTG 
ACTACGGCGA CTCTACTTGC CGCGGTTAAC AGCGCATTAC GCGGCAAAGC AAGCATAACT 
ATCAACCAAG ACTGGGATGA ACCTGTCAAT GCGTTTTTCT TGGTCTGTGC TGAATCTGGG 
GGGGGAAAAT CCCCCTCCAA CAACTTTTTT AAACAACCGC AACTGAACTT CCAAACCGAG 
TGGAATGAGC AAAACAAAAA TCTTTACCTG AGAGCTAGCG TCGACAAAAA GTACTTTGCC 
CAAAAACTCA AAAAACATAC TCAGCAGGCT GCTGAGCTTG ACTATGGCAA CCCAAAGGCA 
CTGGAGCAAT ACCACGCAGA AACTACACGG CTCACTGAGG CATACGAAAA GGCTCTCCGC 
TGTCAACCGC TGGAGCTTTT TGTAGACGAT GTCACTAACA AATCGTTGAT TGAAGCTATG 
AGTCGACAAG ATGGCAGGAT AGCAATCATG GAGCCAGAGG TCAGCGCATT TCGCCACATA 
GTGCGAGCAA AAGAAGTCAG CCCTATTCTG GATACGATTC TCAAGTCTTT CTCAGGAGAG 
CGCATCCAGC TGAATCGTGC AGGCGAGCCA GCACTGACCA TTGAACGGCC AATACTGGCC 
CTAAATATCA TGGTACAGCC CCCAATCATG ATGCAGCTAG CAAAAAACAA AGCCATTCAG 
GGACGCGGGA TTTTAGGCAG ATTTTTTGTA ACTATTGTAG AAAAGCCTCG TTACTCTCGG 
TTCAGACATG ACCCCATTGA GGTTCCTCCT GAAGTTCGTT TTGAGTATCA GGACACTATC 
TATAAAATTC TGACGACTGT AGAAAAAAGC AAGGACCTCT TATCATTCAG TCTTTCCGAC 
GAAGCCACAG AGGCATGGCT GGCAGTCAAG GATGATGTAG AGTCCTCTAT ACCCCACAAT 
CCCCCTCCAG GGTATGGCGA GTGGAAAGCA AAAGCCGGGA AACACCTGTT GCACCTTGCA 
TGCCTTGTTC ATATCTTTGA GCATCAGGCG AGTAATACGA TTATTGACAA GCGCAGCTTT 
GAACTTGCAG AGCTGTTATT CAACTTTTTT GATAAAAATA TGTGGAGTAT GCTTCGCTTT 
ATGTATCCAG AGATTGATTT TCTGGTTGCT GTTAAAGCAC TATCCTCTGG CAAGCTATAT 
AACATGGGCG AATTTAGTGC CCGAGATATG CAGCGTGCAT TGGGAACATA CAACAGCACT 
CAGATAGCAC AAGGTATTGA CTGGCTTTTA GACAATAGGG CTATTGACCC TATTGAACAT 
CGACACATAG AGAACAGTGC GAAAACAACC ATGCATGTTG GTCGTAAAAA ATCCCCTACG 
TATAAAATTA TTGACGCTGA GTGGCACTAT CTTCGAGACG AGTTGCTATA G
 
Protein sequence
MTDKLSPRGR PLYLGSRGRH TRFSRIADSV ADSFNLSKEL TTATLLAAVN SALRGKASIT 
INQDWDEPVN AFFLVCAESG GGKSPSNNFF KQPQLNFQTE WNEQNKNLYL RASVDKKYFA 
QKLKKHTQQA AELDYGNPKA LEQYHAETTR LTEAYEKALR CQPLELFVDD VTNKSLIEAM 
SRQDGRIAIM EPEVSAFRHI VRAKEVSPIL DTILKSFSGE RIQLNRAGEP ALTIERPILA 
LNIMVQPPIM MQLAKNKAIQ GRGILGRFFV TIVEKPRYSR FRHDPIEVPP EVRFEYQDTI 
YKILTTVEKS KDLLSFSLSD EATEAWLAVK DDVESSIPHN PPPGYGEWKA KAGKHLLHLA 
CLVHIFEHQA SNTIIDKRSF ELAELLFNFF DKNMWSMLRF MYPEIDFLVA VKALSSGKLY 
NMGEFSARDM QRALGTYNST QIAQGIDWLL DNRAIDPIEH RHIENSAKTT MHVGRKKSPT 
YKIIDAEWHY LRDELL