Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3351 |
Symbol | |
ID | 3758328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3329054 |
End bp | 3329758 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637784264 |
Product | bacteriophage DNA transposition B protein, putative |
Protein accession | YP_389840 |
Protein GI | 78358391 |
COG category | [R] General function prediction only |
COG ID | [COG2842] Uncharacterized ATPase, putative transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.382717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCGAG ACGTATTCAT AGAAACCCGC AACGTGATGG ATTTCCGCCA GAAGGTAAGA GCGCTGGAAG ACTTCTCCGG TGAGCCGGGC TTCGCGCTTG TTTTCGGGCA GGCCGGACGG GGCAAAACTG AAACTGCGCG TCATTACCAC GCCATGAACG GCGGTATCTT TCTCCGGGTC ATGCAGGGCT GGTCGCAGTG CGCTTTTTTA CAGGAGTTGT GTTTTCAAGT CTGCGGCCTG CGCCCCCGGT CTTCAGCAAC CTGCAAGGCT AAGATTATTG AGGCGCTGGA TAGCATGCCG CAGACACTAT TCGTTGATGA GGCGGACCGC CTGCACGTCG ATCGCGTAGA AGACCTGCGT GACGTCTTTG ACCTGACAAG TTCCACAGTG GTGCTCATCG GCGAACAGGA ATTGCGCGGT TTGCTCAGCA CCCGCCGGAG AATCTGGAGC CGTGTGAAGC AGGTTGTGGA GTTTGGCCCT GTTGCGGAGG AAGACGTCGC TATTTTGGGG GATGAAGCTG CCGGGCTGGA TATTGCTCCG GAAGCCTGCT CACAAATTGT TCGCCTTGCT GACGGCGACT TCCGTCTTGT GTGGAGCTTT ATCCACCAAC TCGAATTAAC GGCCAAGACA CACGGAATAC AACAGATAAA CACAGAACTT GTGGCTCGCG TCTCCAAGCT GGTGGCTAGC TGGAGGCAAC AATGA
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Protein sequence | MRRDVFIETR NVMDFRQKVR ALEDFSGEPG FALVFGQAGR GKTETARHYH AMNGGIFLRV MQGWSQCAFL QELCFQVCGL RPRSSATCKA KIIEALDSMP QTLFVDEADR LHVDRVEDLR DVFDLTSSTV VLIGEQELRG LLSTRRRIWS RVKQVVEFGP VAEEDVAILG DEAAGLDIAP EACSQIVRLA DGDFRLVWSF IHQLELTAKT HGIQQINTEL VARVSKLVAS WRQQ
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