Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3332 |
Symbol | phnK |
ID | 3758309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3316849 |
End bp | 3317703 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637784245 |
Product | phosphonate C-P lyase system protein PhnK |
Protein accession | YP_389821 |
Protein GI | 78358372 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4107] ABC-type phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAATC TGCTCAGCGT TTCCGGCCGT TTTCCGGCCG CACGGAATAT ACCCGCACCC GGCATTCCCG CAGCGCATTG CGAAGAAAAT CCGCTTCTCA GCGTCAAAGG GCTGAGCAGA TATTACGGAG ACCGCGCAGG CTGCCTTGAT GTCTCCTTTG ATCTCTACCC CGGCGAAATC ATCGGCATTG TAGGCGAATC CGGCTCCGGC AAATCCACGC TGCTCAACTG CATTTCCGGC CGTCAGGCAC CCACCTGCGG CTCGGTGCAC TATCGCGGCA AGGACGGCAC CCTGTGCAAT GTGCACGCCG CGCCGGAGCA TATCCGCCGC ATGCTCATGC GCACGGAGTG GGGATATGTG CACCAGAACC CCCGCGACGG CCTGCGGGGC AATGTGAGCG CGGGTGCCAA CATCGGCGAA CGGCTCATGG GCGTGGGCAT GCGTCACTAC GGCAACATCC GCCAGCGGTC GGCCACGTGG CTGGACCGTG TGGAAATTGC CCGCAACCGC ATGGACGACC TGCCGCGCAC CTTTTCCGGC GGCATGCAGC AGCGGCTGCA GATAGCACGC AATCTGGTAT CTGCCCCGCG GCTTGTTTTT ATGGATGAGC CCACCGGCGG GCTGGATGTT TCGGTACAGG CGCGCCTGCT GGACCTGCTG CGCGGGCTGG TGGCCGACAT GGGACTGGCC GTGGTTATTG TGACGCATGA TCTGGCAGTG GCCCGCATTC TGGCACACCG GCTCATGGTC ATGTGTCAGG GGCAGGTGGT GGAGGCAGGT CTGACCGATC AGGTGCTGGA CGACCCGCAC CACCACTACA CCCAGCTGCT GGTTTCTTCC ATCCTGCAGG TCTGA
|
Protein sequence | MDNLLSVSGR FPAARNIPAP GIPAAHCEEN PLLSVKGLSR YYGDRAGCLD VSFDLYPGEI IGIVGESGSG KSTLLNCISG RQAPTCGSVH YRGKDGTLCN VHAAPEHIRR MLMRTEWGYV HQNPRDGLRG NVSAGANIGE RLMGVGMRHY GNIRQRSATW LDRVEIARNR MDDLPRTFSG GMQQRLQIAR NLVSAPRLVF MDEPTGGLDV SVQARLLDLL RGLVADMGLA VVIVTHDLAV ARILAHRLMV MCQGQVVEAG LTDQVLDDPH HHYTQLLVSS ILQV
|
| |