| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3327 |
|---|
| Symbol | |
|---|
| ID | 3758304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3312770 |
|---|
| End bp | 3313525 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637784240 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_389816 |
|---|
| Protein GI | 78358367 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATG ACACGGTACC TGTTGCGCAT CGGGAACTGG AACGGGGAAA CGGAGTGGCG
CTGTGGCGCC AGATTCAGGC TGTGCTGGAG CATGACCTGC GCAGCGGATA TGTGGCTGCA
GGTGAAAAAC TGCCCACGGA GCGGCAGCTG GCACAGCGTT TCGGCGTAAA CCGCCATACC
GTGAGGCAGG CGCTGGCTGA ACTTGCCCGT AAGGAGCTTA TCGTTGTGGA ACAGGGACGC
GGCGCGTTCG CCCGCAGGGA CAAGCTTGAT TACGCGCTTG CGCGGCGGGT CCGCTTCAGC
GAAAACCTGC TGCGGCAGAG CCGTATTCCC AGTGAGCGGC TGCTGGGCAG CGACAAAGTG
CAGGCCGGGC GCAGGGCGGC GGAAGCGCTG CAGGTGCTGC CCGCCACGAT GCTGCTGCGG
CTGCGCACCG TGGGTAATGC CGACGGCCGC CCCCTGTGCT GCACCACGCA CTATTTTCCG
TACGGGCGGT TTGCGGGTTT TGCCGCTGTC TACGGACAGC TGCATTCCGT CACTGCTGCA
TTCCGGGCGC TGGGGGTGGC TGATTATGTA CGCACCTCCA CCCGCATCAC GTCCAGAATG
CCCGATGCCG CAGAGGTCAG GGCGCTGGGG CTGGCGCGGC AGACTCCGGT GCTGGTGGTG
GAATCGGTCA ATGCCGACGG CGCCGGTACT CCCGTGGAAT ACGGGGTGTG CGTCTGGGCG
GCCGACCGCA TCCAGTTTGT CATTGATGCC GCGTAA
|
|---|
| Protein sequence | MTHDTVPVAH RELERGNGVA LWRQIQAVLE HDLRSGYVAA GEKLPTERQL AQRFGVNRHT
VRQALAELAR KELIVVEQGR GAFARRDKLD YALARRVRFS ENLLRQSRIP SERLLGSDKV
QAGRRAAEAL QVLPATMLLR LRTVGNADGR PLCCTTHYFP YGRFAGFAAV YGQLHSVTAA
FRALGVADYV RTSTRITSRM PDAAEVRALG LARQTPVLVV ESVNADGAGT PVEYGVCVWA
ADRIQFVIDA A
|
|---|
| |