Gene Dde_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3298 
Symbol 
ID3758275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3286607 
End bp3287773 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content60% 
IMG OID637784211 
Producttyrosine-specific transport protein 
Protein accessionYP_389787 
Protein GI78358338 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGATT CCAGACATTC CGGCGCGGCC TGTATTGTGG CGGGCACCGC CATAGGGGCG 
GGCATGCTGG GGCTGCCCAT GGTTATCGGT CCCATGGGCT TTCTGCCGGG AACATTGCTT
ATGGCCGTGG TATGGGCCAT GGCGCTTTTT TCCGCGCTGC TTCTGCTTGA AGTGAATCTG
AAAATAGGCG CCGGAAAAAA TTTCAATAAT ATGGCCCGCG AAGTGCTGGG CCGCGGCGGG
CAGATAGTGG CCACGGGCAG CATGGCTTTT TTGCTGTATG CGCTGCTGGT AGCCTATCTG
ACCGGTGTGG GCGGTCTTGT GGCACGTACC GGCGGCGCGC TGGGCATGGC CGTCACTCCG
CAGGCCGGCA GTCTGCTTTT TGCAGTGGCC GGCGGTGTGG TGGTGCTTAT CGGCACGGCG
CTTGTGGTCA GAGTCAATAA AGCGCTTTTC TACGGTATGC TTGTGGCCAT GGTTGTGGCT
TTTGCCAGCC TTGTGCCGGG GGTGGATGTG GCGAACCTGA CCACGGCGGC CCCCCGCGAA
AAGCTGGTAC TGGCCTGCCT GCCCGTGCTG TTTACGTCTT TCGGGTTTCA TACGGGCATA
CCGAGCATCG TCCGTTTTTT GCGCAGCGAT GCCCGCAGCC TGCGAAGAGT CATTCTGGTG
GGTACGGCGT TGCCCGTCAT TTGTTACTTT CTGTGGCTTA TGGTGTCGCT GGGAGGTATG
CCCGCTGCGG ACATCAGCCG TATGGGCGGT AATGTGGACA CGCTTGTTTC CGCCCTTGCC
GGCAGTTCGG CATGGCTCGG ATCGGTACTG TCCGCTTTTG CCGCTCTGGC GCTGATCACA
TCGTTTCTCG GGGTGGCACT GGCACTGTTT GACCTTCTGG CCGAAACATT CCGGCTTAGC
GATTCTGTGC TGCACCGGAC GGTTACGGCT GTGCTGGTGT TTGCCCCGCC GGTGACTGCC
GCGCTATTGT CGCCGGGCAG ATTCATTCAG GCACTGGCCC ATGCGGGCGC CGCGTTGACC
ATCCTTGCGG TGTTTCTGCC CTGTGCCATG GCATGGAAGC TGCGGCGCGA CAATGTGCAG
GCGTCCTATC AGGTGGCGGG CGGTACCGCC GCGCTTGTGG TGACCTCTGC TTTCGGTTTG
CTGGTGGTTT CGGCAAGCTA TCTGTAA
 
Protein sequence
MLDSRHSGAA CIVAGTAIGA GMLGLPMVIG PMGFLPGTLL MAVVWAMALF SALLLLEVNL 
KIGAGKNFNN MAREVLGRGG QIVATGSMAF LLYALLVAYL TGVGGLVART GGALGMAVTP
QAGSLLFAVA GGVVVLIGTA LVVRVNKALF YGMLVAMVVA FASLVPGVDV ANLTTAAPRE
KLVLACLPVL FTSFGFHTGI PSIVRFLRSD ARSLRRVILV GTALPVICYF LWLMVSLGGM
PAADISRMGG NVDTLVSALA GSSAWLGSVL SAFAALALIT SFLGVALALF DLLAETFRLS
DSVLHRTVTA VLVFAPPVTA ALLSPGRFIQ ALAHAGAALT ILAVFLPCAM AWKLRRDNVQ
ASYQVAGGTA ALVVTSAFGL LVVSASYL