Gene Dde_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3255 
Symbol 
ID3758232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3253693 
End bp3254862 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content49% 
IMG OID637784168 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_389744 
Protein GI78358295 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase
[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA AAAAGATACT CTTTATTACG GGCACCCGCG CTGACTTTGG CAAGTTATGT 
AGCCTCATTG ATAAAGTGAG CGAGCATACC GAGTTTGAGT ATTGTATTTT TGTCACGGGG 
ATGCACACTC TTTCCCGTTA CGGATACACA GTGGACGAGG TGATGAAGAA ATACAGCTCG 
TTCAGGCTGG AGGGAGGTTT TCGTAACGTT CACGTGTTTA TGAATCAGGT CCATGGAGAA 
TCCATGGATA TGGTGCTTGG AAATACCATT TTTGGCCTCT CCCGTTATGT CAGCGAGTAT 
CAGCCTGATA TGATTGTAGT GCACGGTGAC AGAGTTGAAG CGTTGGCAGG ATCAATAGTC 
GGTTCGTTGC GCAATATTCT GGTGGCACAT GTCGAAGGCG GTGAGCTGTC AGGCACCATA 
GACGAACTCA TCCGTCATGC CGTATCCAAA ATGGCTCACC TGCACTTTGT GGCAAACGGG 
GATTCCCGCA GGAGACTGAT GCAGATGGGC GAAGCGGAAG AGACTATCTA TCCCATCGGA 
TCACCGGACG TAGACCTGAT GTTCTCCCCG AATCTACCCA GCAAGGAATC GGTGCTTGCA 
TACTATAACA TCCCGTTTAC GGAGTATGCC ATAACCCTGC TGCACCCTGT GACAACAGAT 
CTGGAGCAGA CAAAGAAGAT GGCCGGTGCC GTTGTGGACG CAATGCTGGA TTCAGACGAT 
AATTATATCG TTATCTATCC CAATAACGAC CACGGAAGCG ACATTATCCT GGATGAATAT 
GACAGGTTGT CAGGAGAAGG CAGGATAGCT GTTTACCCTT CTCTGCGGGT GGAGTCTTTT 
TTGGTCCTGT TGCGAGCTGC CAAATATCTG CTGGGCAATT CCAGCGCGGG TATTCGTGAG 
ACCCCTTGTT ACGGTGTGCC GTCTATCAAT ATCGGCAGCC GGCAGGATGG ACGGTTCTGC 
TGTTCGTCAA TCATTAATGT GCCGGGTTCA TATGATGCCA TTGTGAAGGC TTTGGCCGAT 
GTCCGCAAAA TGGTGCCACA TCCTCCTCGG TTCGAGTTCG GGAGAGGTAA CAGTGCAGAG 
CAGTTCATCA AAATTCTTAT GGATGAAAAA ACGTGGCTCA CAAAGCCGCA AAAGCAGTTT 
GTTGATCATC ATTTTGCACT CTGCCGCTGA
 
Protein sequence
MAKKKILFIT GTRADFGKLC SLIDKVSEHT EFEYCIFVTG MHTLSRYGYT VDEVMKKYSS 
FRLEGGFRNV HVFMNQVHGE SMDMVLGNTI FGLSRYVSEY QPDMIVVHGD RVEALAGSIV 
GSLRNILVAH VEGGELSGTI DELIRHAVSK MAHLHFVANG DSRRRLMQMG EAEETIYPIG 
SPDVDLMFSP NLPSKESVLA YYNIPFTEYA ITLLHPVTTD LEQTKKMAGA VVDAMLDSDD 
NYIVIYPNND HGSDIILDEY DRLSGEGRIA VYPSLRVESF LVLLRAAKYL LGNSSAGIRE 
TPCYGVPSIN IGSRQDGRFC CSSIINVPGS YDAIVKALAD VRKMVPHPPR FEFGRGNSAE 
QFIKILMDEK TWLTKPQKQF VDHHFALCR