Gene Dde_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3250 
Symbol 
ID3758227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3248345 
End bp3249298 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content46% 
IMG OID637784163 
Productpolysaccharide deacetylase family protein 
Protein accessionYP_389739 
Protein GI78358290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG TAATGTATCA TTACATCAGA AAGCCCGATG CGAACTTTCC GTACTGGCGT 
TTTTTGCATG TTGACGACTT TCGTCGCCAG CTGGATTTTT TCCAGAAAGA TGGAAACATC 
GTGACCCGCG AACAGCTGGA ATATGCCTTG GAGCACGGAG ATCCGTTGAC TGATAAGGAC 
TATCTGCTGA CATTTGATGA CGGATTGCGG GATCATTATC AATTCGTTCT GCCGGAATTA 
CAGCACAGAA ATGTTACAGG AATCTTTTCC TGCTGTGCTG GTTCAGCCAT GCCTGTGAAT 
GTGCTTGATG TGCACTTAGT GCATGCCCTG ATCGGGGCTT ATGGCGGCGA AGCGATGCTG 
GCTCATCTGA AAAAAACAAT CGGGTCTGCT CAGATAGACT TGAACTCCAC ACGATTTCGT 
CATGCAGTGT ATAAACTCCA GCCAAGAAAT GATGAAACTG AGTTTAAACG CATTGTAAAC 
TATTGTCTGG ACAGAAAAGC GCGAACTTTT GTTCTGGAGA AGCTTCGTTC CAACCTGTTG 
CCTGAATTTA ACAGCGACAG GTGTTTTTAT CTGCAGCCAG CGGAATTGAA GGAGATGGAT 
GCAGCCGGCA TGATTGTTGG CGGGCATACT GTAACGCATA ATCTTCTTGC TCGTCTTTGC 
CCTGCTGCCC AACGGGAAGA GATAGGAAGC AATATAGACT GGTTGTCGGC TGTTCTGGGC 
CGGCGTATTT TATGGTTTTG TTTCCCGTAT GGTGGTGAAA TCAGTTATAA TGAGTATACA 
CTGCAAATTC TAGAAGAGCA CGGTATACGA TATTGCCTGT CGGTGGATTC AAGGAATGTG 
GTGGTTGATG ATCTTGAAAA ACCACTGACT CTGCCAAGAT ACGATTGTAT GGAATTTCCT 
TTTGGGAAAA GCTACCAATC TCTCCCGCAT CCACGGCGGG CATCAGGCCT TTAA
 
Protein sequence
MKIVMYHYIR KPDANFPYWR FLHVDDFRRQ LDFFQKDGNI VTREQLEYAL EHGDPLTDKD 
YLLTFDDGLR DHYQFVLPEL QHRNVTGIFS CCAGSAMPVN VLDVHLVHAL IGAYGGEAML 
AHLKKTIGSA QIDLNSTRFR HAVYKLQPRN DETEFKRIVN YCLDRKARTF VLEKLRSNLL 
PEFNSDRCFY LQPAELKEMD AAGMIVGGHT VTHNLLARLC PAAQREEIGS NIDWLSAVLG 
RRILWFCFPY GGEISYNEYT LQILEEHGIR YCLSVDSRNV VVDDLEKPLT LPRYDCMEFP 
FGKSYQSLPH PRRASGL