Gene Dde_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3216 
Symbol 
ID3758191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3206166 
End bp3206822 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content57% 
IMG OID637784127 
Productphosphatidylserine decarboxylase 
Protein accessionYP_389705 
Protein GI78358256 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAG CTACCCATTC CATAACGCCT GAAGGTTTTC CCGTCATCGG TCTGACCGCG 
CTTGCCGCAC TGGTCTTCGC CATCATCGAC TGCTGGTTCA TGGCCGTTGT GTTTCTGCTG
CTGTGCTGGT TCAGCGTGCA TTTTTTCCGC GATCCGGAAA GGGTGGTGCC TTCGGCCCCC
GGCGCAGGGG TAAGCCCAGC AGACGGCCGC ATCATAAAAG TGCAGCCCAT GCCCGACCCT
TTCACCGGAG AACCGCGCAT GTGCGTCTGC ATTTTCATGA ATGTCTTCAA CGTGCATGTA
AACCGCTTTC CGGTCAGCGG CACCGTGCAG AGCATTGCCT ACCATCCGGG CAAGTACTTC
AATGCGTCGT GGGACAAAGC TTCGACTGAC AACGAACGCT GCGCCTATGA CATAGTGGAC
GCCGACGGCC TGCGCTGGAG CATGGTGCAG ATAGCCGGAC TCATCGCCAG ACGCATAGTA
TGCAGGGTGG AAGAAGGCGA CACGCTCAGA CGCGGCGAAC GCTGCGGCAT GATCAGGTTC
GGTTCGCGGG TTGACGTTTA CCTGCCGGAA GAGTATGAAC CAAAGGTCAC AGTGGGTGAA
ACCGTTTTTG CAGGGCAGAC AGTACTGGCC GCAAAAAAGG AGCAACCGGC GGAATAA
 
Protein sequence
MQKATHSITP EGFPVIGLTA LAALVFAIID CWFMAVVFLL LCWFSVHFFR DPERVVPSAP 
GAGVSPADGR IIKVQPMPDP FTGEPRMCVC IFMNVFNVHV NRFPVSGTVQ SIAYHPGKYF
NASWDKASTD NERCAYDIVD ADGLRWSMVQ IAGLIARRIV CRVEEGDTLR RGERCGMIRF
GSRVDVYLPE EYEPKVTVGE TVFAGQTVLA AKKEQPAE