Gene Dde_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3212 
Symbol 
ID3758187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3203263 
End bp3203901 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content61% 
IMG OID637784123 
ProductCheD, stimulates methylation of MCP proteins 
Protein accessionYP_389701 
Protein GI78358252 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1871] Chemotaxis protein; stimulates methylation of MCP proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGAT ACAGTGCGGA ACAGCGCGCC GCCATGCAGT GCATGTCGCT GGCCCGTCAT 
GGTTTACCCC ATGCGCTGGC CGACTGCGGA CTGCCTCATG TACATCTGAA GATAGGCGAG 
GGCATCGTCA CGCGGCGGGC ATTGCTTATC TCCACTGTGC TGGGGTCTTG TGTTTCGGTC 
ACGTTTTTTA GCCGCAGACT GCAGCTGGCG GGCATCTTTC ATGCAATGCT GCCGGTGATC 
ACGCAAAGCT ACCGGCCCTG TAACGAGCCG TGCCGGTTTG TTGATTCGGC CATAGAGGCG 
GTGTACGGCA ACTTTGAAAA GCGCGGCCTG CATCCCGAAG AGGTGGAGGT GAAGCTGTTC 
GGCGGCGCCT TCAGCATGGG GCTGCGCGAA GAACATCCTG ACCGGTGCAT GATAGATGTG 
GGCGGGCGTA ATGTGCTGAC CGCGCGTGAG GTTCTGGCCG CCAAAGGGCT GGAGATACGC 
AGCGAACAGG TGCAGGGCAC GCGTGGCCGC AAGCTGCTTT TCAATACGCG TACGGGCGAA 
GTGTGGGTGA AGCTGCTGAA CAACGCGGCC AACCAGCTTG CCCGCAGGCA GGAAGAACAG 
GCCAGAGCGC AGAGCGCCCG CGGATGTTCT CTGGACTGA
 
Protein sequence
MSGYSAEQRA AMQCMSLARH GLPHALADCG LPHVHLKIGE GIVTRRALLI STVLGSCVSV 
TFFSRRLQLA GIFHAMLPVI TQSYRPCNEP CRFVDSAIEA VYGNFEKRGL HPEEVEVKLF 
GGAFSMGLRE EHPDRCMIDV GGRNVLTARE VLAAKGLEIR SEQVQGTRGR KLLFNTRTGE 
VWVKLLNNAA NQLARRQEEQ ARAQSARGCS LD