Gene Dde_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3187 
Symbol 
ID3758162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3174504 
End bp3175817 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content60% 
IMG OID637784098 
ProductUDP-glucose/GDP-mannose dehydrogenase family protein 
Protein accessionYP_389676 
Protein GI78358227 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.878007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGGT TTGAAGAACT TACCGACGCA AATGCCGCCG TGGCCGTTGT GGGTCTCGGC 
TATGTTGGGC TGCCTCTTGC CGTGGCCTTA AGCGAACACT TCCGCGTGAT CGGCTTTGAC
ATTTCGCAAC GCCGCGTGGA TGCCCTCATC AAAGGTGAAG ACGCCACAGG CGAAGTGGAA
AATTCCCGGC TGGCGGCGTG CAAGGCAGAA TTTACCGCAG ACCCCGCGCG CATAGGTCAG
GCGGACATTG TCATCGTGGC CGTGCCCACG CCCATCGACG GCAATCGCCG GCCCGATCTT
TTTCCGGTGG AAAGCGCCTC ACGCACTGTG GGCCGCACCA TGAAAAAAGG CTGCGTGGTG
GTATACGAAT CCACGGTATA CCCCGGCCTT ACCGAAGAAA TCTGCGTGCC CATTCTTGAA
AAAGAATCGG GCATGAAATT CGGCACCGAC TTCACCGTGG GCTATTCGCC CGAGCGCATC
AATCCGGGCG ACAAAGTTCA CACCCTCGAA ACCATCGTCA AGGTTGTTTC CGGCAGCGAT
GAAGCCACGG CGGACCTGCT GCAGCGCATG TACGGCACAG TGGTCACCGC CGGAACATTC
CGCGCATCCA GCATCCGCGT TGCCGAGGCA GCAAAGGTCA TCGAAAACAC CCAGAGAGAC
CTGAACATCG CTCTTATGAA CGAACTGGCG CTGCTGTTCG ACCGCATGGA CATCGACACG
CTGGAAGTGC TTGAAGCAGC CGGCACCAAA TGGAATTTCC TGCCGTTCCG TCCCGGTCTC
GTGGGCGGCC ACTGCATCGG CGTCGACCCG TACTATCTCA CCTTCAAGGC CGAAGCGCTG
GGACACCACC CGCAGGTCAT TCTTGCCGGA CGCCGCATCA ATGACGGCAT GGGCAAATTC
GTGGCCGAAA CCTGCGTGAA AAAAATGATC CGCAAAGGCA ACGTGGTGGC CGGTTCCCGC
GTGGGCGTGC TGGGGCTTAC CTTTAAGGAA AACGTACCCG ACCTGCGCAA CACCCGCGTG
GTGGACGTGA TTGACGAACT GCGCGACTAC GGCGTGCATG TGCTGGTGCA CGACCCGCAG
GCCGACCCCG CGGAAGCCCA CGAAGAATAC GGCCTGACCC TGACCGGTCT GGACACCCTG
CGCGAGCTGG ATGCTGTTAT TCTGGCCGTA CCGCACGCGG AATACGACGC ACTGCAGGCA
CAGGATATCC GCGGCTGGTT CCGCGATCCG CAAAAAGCCC TGCTGCTGGA TATCAAAGGC
GCAAAGTCGC CCGCCGCGTT CACTGACGCC GGTTTTGACT ACTGGCGCCT GTAA
 
Protein sequence
MIRFEELTDA NAAVAVVGLG YVGLPLAVAL SEHFRVIGFD ISQRRVDALI KGEDATGEVE 
NSRLAACKAE FTADPARIGQ ADIVIVAVPT PIDGNRRPDL FPVESASRTV GRTMKKGCVV
VYESTVYPGL TEEICVPILE KESGMKFGTD FTVGYSPERI NPGDKVHTLE TIVKVVSGSD
EATADLLQRM YGTVVTAGTF RASSIRVAEA AKVIENTQRD LNIALMNELA LLFDRMDIDT
LEVLEAAGTK WNFLPFRPGL VGGHCIGVDP YYLTFKAEAL GHHPQVILAG RRINDGMGKF
VAETCVKKMI RKGNVVAGSR VGVLGLTFKE NVPDLRNTRV VDVIDELRDY GVHVLVHDPQ
ADPAEAHEEY GLTLTGLDTL RELDAVILAV PHAEYDALQA QDIRGWFRDP QKALLLDIKG
AKSPAAFTDA GFDYWRL