| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3174 |
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| Symbol | |
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| ID | 3758149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3161454 |
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| End bp | 3163025 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637784085 |
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| Product | dipeptide ABC transporter substrate-binding protein |
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| Protein accession | YP_389663 |
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| Protein GI | 78358214 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGT CCACAGCGCG TCCTCACTTT GCGGCGGCGC GGCACATGAT GGGCATTGCT
GCGCTATTTG CGGCAATGCT GACCGTTTTT GCGGCGTTCG CCCCGCAGCC CGCGGCCGCG
GCCGGTTCGC TGGTTTTTGC GCGGGCCAGC GATGCCGTGA CTCTGGACCC GGCGCGCGCA
CCGGACCTTG AATCCACCAA GGTCATCGCC AACATATACG AAGGGCTGGT CACCGTGGCA
GAAAGCGGCA CGGAAATAGT GCCTGCGCTG GCCCGTTCGT GGGAAAGCTC CGCCGACGGT
ACCCGCTGGA CATTCCACCT GCGGCACGGG GTCGTGTTTC ACGACGGCAC GCCGCTTACC
GCACAGGCCG TTGTGCAGTC GTTCATGCGG CAGATCGATC CGGAACGTTC TGATTTCGCC
GGAGATTCCG GCGTGTCACG GTTTACGTTC CGCCACATCA CCGCCGTCAG CGCCCCCGAC
GACCACACCG TGCTCATAAC GCTGGATGCG CCGTTCCCGC CTTTTCTGCA CAATATGTCC
ATGGCCACCG CTTCGGTCAT CAGTCCTGCC GGCGGTGATA TTCCCGCCGG TACAGGGCCT
TTCCGTCTGC ATACGTGGGA AAAAGGCAGA AGAATAGTGC TGAAGGCCCA CACGGAATAC
TGGCGGGGCG CCCCTCAGCT GGATACCGTG GTGCTGGAGG TCATACCCAA AGCATCGGAC
AGGCTTACCG CACTTAACGT CGGCGCCATT GATGCCTTTG ACGGAGTGAC CAGTGACATA
GCCCGCCATG CATCAGCTCA AAGCTCCATA CAGCTTTCCA GCCGTACCGG TCTGCGCATA
GCCTATCTGG CCATGAACAC GCAAAAGCCC CCTTTTGACA ATCCGGCAGT GCGCAGAGCT
CTGAACATGG CCGTGAATAA AATCCCCATG CAGACTCTGA TCTACGGCAA CACCGCCGTG
GTGGCGCACA ATGTCATTCC CGAAACGGTA TGGGCCTATG ACGAAACCCT GCCCCCCTAT
GTCTACGATC CCGCGGCCGC GCGTGACATG CTGGCACAGG CCGGTTATCC GCAGGGATTC
ACCGCCACGC TGTATTTCTG TCCGCGCCCT TTTTACCCCG AAGGAATCGA AGCTCTTATC
AGAAATGAAC TGGCAGCCGT CAACGTGCGT CTGGATATCC GCTACACCGA ATGGACCGAA
CACCTGAAAG CCACCGGCAA CGCGGAGCAC GATATGTGCA TCATCAGCTG GGGCGGATAC
AACAGCGATC CCGACAACTT CTTCTACCCG CTGTTCCATC CTCACAATGC CGTGACACCC
CATGCCCAGA ACAGGGCGTT TTATACCAAC CCCCAAGTCA GCCGGCTGAT AGAAAAAGCC
CAGCAGGAAA CAGACCCCGG AATCCGCAAG GAACACTACC GGCGCATACA ACGGCTTATC
AGAAATGACG CCCCGTGGAT TCCGCTGGTC TACAACCGCG AACTGCTGGC GCATTCCGTC
GACGTTACCG GTCTGCGCCT GGACGCCACA GGCGTTGTGC GGTTTTACGG CGCCCACGTC
CGCCACGACT GA
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| Protein sequence | MPESTARPHF AAARHMMGIA ALFAAMLTVF AAFAPQPAAA AGSLVFARAS DAVTLDPARA
PDLESTKVIA NIYEGLVTVA ESGTEIVPAL ARSWESSADG TRWTFHLRHG VVFHDGTPLT
AQAVVQSFMR QIDPERSDFA GDSGVSRFTF RHITAVSAPD DHTVLITLDA PFPPFLHNMS
MATASVISPA GGDIPAGTGP FRLHTWEKGR RIVLKAHTEY WRGAPQLDTV VLEVIPKASD
RLTALNVGAI DAFDGVTSDI ARHASAQSSI QLSSRTGLRI AYLAMNTQKP PFDNPAVRRA
LNMAVNKIPM QTLIYGNTAV VAHNVIPETV WAYDETLPPY VYDPAAARDM LAQAGYPQGF
TATLYFCPRP FYPEGIEALI RNELAAVNVR LDIRYTEWTE HLKATGNAEH DMCIISWGGY
NSDPDNFFYP LFHPHNAVTP HAQNRAFYTN PQVSRLIEKA QQETDPGIRK EHYRRIQRLI
RNDAPWIPLV YNRELLAHSV DVTGLRLDAT GVVRFYGAHV RHD
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