| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3162 |
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| Symbol | infB |
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| ID | 3758137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3148596 |
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| End bp | 3151550 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637784073 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_389651 |
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| Protein GI | 78358202 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA CTAAAATCAA AATTAAGGAC TTGGCCACCG AGCTGAACAT CGCTCCGAAA
GAAGTGCTGG CAGCGGCCAA GAAACTGGAT ATTCCGGCGA AAAACGCCAC CAGCACGCTG
ACCACAGAAG AAGCGCGCAA GGTGCGCGGT CAGGTGCAGG AAGCATCGGG CGACGCCAGA
CGCAAAGACG GCGCTTCGGA TGTCATCATC CGCAGACGCC GCAAGGGCTC CGGCGCAAAG
CCGGCTGCCC GCGAAGAAGC AGCCCCTGCC GAAACAGAGG CACAGGCCTC TCCCGCGCAG
CCCGAAGCCA AGGCGGCCGC ACCGGCAGCC GAAGCTGAAG AAGCTCCCGC AGCCAAGCCC
GCGCCTGCCA AAGCACGCAA GGCGGAAGCA CGGACAGAAG CGCCCAGAGC GCGCATCATC
CGGCCAGCCA CCCCTCAGGC GGAGGAAAAA GCAGAACCCG CTCCCGAAAC GGCCGCGCCC
GCGCAGCCCG CACCGGAAGC GCAGTCTGCC GCGCCTGAAA AAGTTGAAGC ACATGATGCG
GGTGCACCGG TGCAACAGGC GGAAACAACC GAATCCGCTC CGGCTGAACC CGCGGCTGAA
AAGGCGCCGG CAGAAAAGCG CCGTTACGAG GTTTCAATGG AACCTGAAAA AGACTCCGTG
CAGGCCGACA CCGAAGCCGA TGGCGACGCT GACGGCGGCA GGAAAAAGAA AAAGAAAAAG
AAACGCGAAG AAACCGCAGG GCCTCAGGTC CGTGTAATCT CGCGCCCCGA CCCTGCAGCC
GTGCAGGCTC AGGCCGCAGC TGCGGCTCAG GCCCGCGAAG AAAGGGCAGA ACGTCCTGAC
CGCGGTCCCC GGCCGGCCGG CGCACGCCCC GCAGGTCCCC GTCCCGGCGG TCCCCGTCAG
GGTGACTCGC GTCCCGGCGA TGGCCGTCCC GCACCCCGCT CCGGCGCTCC GCGTCCGGGT
GGTGCCCGCC CCGCGGCCGG TTTCGGACAG CCCGCTCAGG CCGAAAATTC TTCTCCCTTT
GCCGACGGAC AAAGCAAGAA GAAACGCCAG AAAGGCCGCC GTACGGTGGA ATTCGGCGAC
AAGGGCGCAG GCGGCAAAAA AATGCGCGAA GATGTGGGCG GCAACTGGAA CCGCGGCAAA
AAGGGCAAAC GCAAGCCCGA AACAAAGCCC GTGTCCACGC AGCCCCAGCG CGCGGCCAAG
CGTAAAATCA AAGTGGATGA AGCTATCCGC GTGTCCGATT TTGCCCACCA GATGGGTGTA
AAGGCACCGG AAATAATAAA AATTCTGATG TCGCTGGGCA TTATGGCCAC CATCAACCAG
TCGCTGGATA TCGACACCGC GACTGTGGTT GCCGCAGAAT TCGGTTACGA AGTGGAAAAG
GTGGGCTTCT CTGAAGATGA GTTCCTCCTG CCCAAGGAAG TGGATGCCGA CGAACTGCTG
CTGCCCCGTC CCCCTGTTGT CACCATCATG GGGCACGTTG ACCACGGCAA GACGTCGCTG
CTCGACGCCA TCCGCAAATC CAGTGTCACC ACCGGTGAAG CGGGCGGCAT CACGCAGCAC
ATCGGCGCAT ACCACGTAAG CACCAAGCGC GGCGACATCG TGTTTCTTGA CACCCCCGGT
CACGAGGCGT TCACCGCCAT GCGTGCCCGC GGTGCACAGG TGACCGACCT TGTCATTCTG
GTGGTTGCCG CGGACGACGG CGTGATGGAA CAGACCCGTG AAGCCATCAG CCACGCCAAG
GCCGCAGGTG TGCCCATCGT GGTTGCCGTG AACAAAATAG ACAAGGAAGG CGCCAACAGA
GACCGCGTAA TGCGTGAACT GGCGGAGCAG GACCTTGTGC CCGAAGAATG GGGCGGCGAC
ACCATTTTCT CGTATGTTTC GGCCAAGACC CGCGAAGGTC TGGACGATCT GCTGGAAATG
CTGGCACTGC AGGCCGAAGT TCTGGAACTG AAAGCCAACC CCGACAAGCC CGCACGCGGA
CGCATTGTGG AAGCCAAACT GGACAAGGGC CGCGGTGCCG TGGGTACCGT GCTCATTCAG
GAAGGCACGC TGAAACACGG CGACGCATTT GTCTGCGGCG TTTTCAGCGG GCGTGTGCGC
GCCATGTTCA ATGATCAGGG TAAAAAAGCC AAGCAGGCAG GCCCCTCCAT TCCTGTCGAA
GTGCAGGGAT TTGAAGGCGT ACCTGTGGCA GGTGAAGAGT TCATCTGCGT CAAGGATGAA
AAGGTTGCCC GCCGCATTGC AGAACAGCGC GCCATCAAAC AGCGCGAACG CGATCTGGCA
CGCGAAAGCA AGGTCACCCT GGAAACATTC CTTGCACGGC GCAAAACCGA TGCCGAAACG
CAGACCCTCA ACCTCGTGCT CAAGGCCGAC GTGCAGGGTT CCGTGGGCGC CATCACCGAT
GCGCTGCGTA AAATGCAGAC CGAAAAAGTC AAAGTGGACA TCATCCACAG CGGCGCCGGT
GCCATCACCG AATCCGATAT TCTGCTGGCT TCCGCTTCGG ACGCCATCAT CATCGGCTTC
AACGTGCGCC CCACCGCCAA AGTGAAGGAT GTGGCCGAGC AGGAAAAGGT GGAAATCCGC
TTCTACGACA TCATTTACAA GCTGTCGGAA GAAATCAAAT CCGCCATGGC CGGTCTGCTG
GCCCCTGTGG TCAGAGAACA GTACCTCGGT CAGGCCGAAG TGCGCGAAAC CTTCAGCGTG
CCCAAGGTGG GAACCGTTGC CGGCTGCCAT GTGGCCGACG GCAAGATCAT CCGCAACACC
AAGGTGCGCC TGCTGCGCGA CGGCGTGGTC ATCTACACCG GACGCATCAA CTCGCTCAAG
CGCTTCAAGG ACGACGTCAA GGAAGTTGCC AAGGGCTTTG AATGCGGCAT GGGTCTTGAA
AACTACAACG ACATCAAGAT AGGCGACATC ATCGAAGCCT TTGAAGAAGT CGAAGAAGCA
GCGACCCTCG ATTAA
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| Protein sequence | MSETKIKIKD LATELNIAPK EVLAAAKKLD IPAKNATSTL TTEEARKVRG QVQEASGDAR
RKDGASDVII RRRRKGSGAK PAAREEAAPA ETEAQASPAQ PEAKAAAPAA EAEEAPAAKP
APAKARKAEA RTEAPRARII RPATPQAEEK AEPAPETAAP AQPAPEAQSA APEKVEAHDA
GAPVQQAETT ESAPAEPAAE KAPAEKRRYE VSMEPEKDSV QADTEADGDA DGGRKKKKKK
KREETAGPQV RVISRPDPAA VQAQAAAAAQ AREERAERPD RGPRPAGARP AGPRPGGPRQ
GDSRPGDGRP APRSGAPRPG GARPAAGFGQ PAQAENSSPF ADGQSKKKRQ KGRRTVEFGD
KGAGGKKMRE DVGGNWNRGK KGKRKPETKP VSTQPQRAAK RKIKVDEAIR VSDFAHQMGV
KAPEIIKILM SLGIMATINQ SLDIDTATVV AAEFGYEVEK VGFSEDEFLL PKEVDADELL
LPRPPVVTIM GHVDHGKTSL LDAIRKSSVT TGEAGGITQH IGAYHVSTKR GDIVFLDTPG
HEAFTAMRAR GAQVTDLVIL VVAADDGVME QTREAISHAK AAGVPIVVAV NKIDKEGANR
DRVMRELAEQ DLVPEEWGGD TIFSYVSAKT REGLDDLLEM LALQAEVLEL KANPDKPARG
RIVEAKLDKG RGAVGTVLIQ EGTLKHGDAF VCGVFSGRVR AMFNDQGKKA KQAGPSIPVE
VQGFEGVPVA GEEFICVKDE KVARRIAEQR AIKQRERDLA RESKVTLETF LARRKTDAET
QTLNLVLKAD VQGSVGAITD ALRKMQTEKV KVDIIHSGAG AITESDILLA SASDAIIIGF
NVRPTAKVKD VAEQEKVEIR FYDIIYKLSE EIKSAMAGLL APVVREQYLG QAEVRETFSV
PKVGTVAGCH VADGKIIRNT KVRLLRDGVV IYTGRINSLK RFKDDVKEVA KGFECGMGLE
NYNDIKIGDI IEAFEEVEEA ATLD
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