Gene Dde_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3162 
SymbolinfB 
ID3758137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3148596 
End bp3151550 
Gene Length2955 bp 
Protein Length984 aa 
Translation table11 
GC content61% 
IMG OID637784073 
Producttranslation initiation factor IF-2 
Protein accessionYP_389651 
Protein GI78358202 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA CTAAAATCAA AATTAAGGAC TTGGCCACCG AGCTGAACAT CGCTCCGAAA 
GAAGTGCTGG CAGCGGCCAA GAAACTGGAT ATTCCGGCGA AAAACGCCAC CAGCACGCTG
ACCACAGAAG AAGCGCGCAA GGTGCGCGGT CAGGTGCAGG AAGCATCGGG CGACGCCAGA
CGCAAAGACG GCGCTTCGGA TGTCATCATC CGCAGACGCC GCAAGGGCTC CGGCGCAAAG
CCGGCTGCCC GCGAAGAAGC AGCCCCTGCC GAAACAGAGG CACAGGCCTC TCCCGCGCAG
CCCGAAGCCA AGGCGGCCGC ACCGGCAGCC GAAGCTGAAG AAGCTCCCGC AGCCAAGCCC
GCGCCTGCCA AAGCACGCAA GGCGGAAGCA CGGACAGAAG CGCCCAGAGC GCGCATCATC
CGGCCAGCCA CCCCTCAGGC GGAGGAAAAA GCAGAACCCG CTCCCGAAAC GGCCGCGCCC
GCGCAGCCCG CACCGGAAGC GCAGTCTGCC GCGCCTGAAA AAGTTGAAGC ACATGATGCG
GGTGCACCGG TGCAACAGGC GGAAACAACC GAATCCGCTC CGGCTGAACC CGCGGCTGAA
AAGGCGCCGG CAGAAAAGCG CCGTTACGAG GTTTCAATGG AACCTGAAAA AGACTCCGTG
CAGGCCGACA CCGAAGCCGA TGGCGACGCT GACGGCGGCA GGAAAAAGAA AAAGAAAAAG
AAACGCGAAG AAACCGCAGG GCCTCAGGTC CGTGTAATCT CGCGCCCCGA CCCTGCAGCC
GTGCAGGCTC AGGCCGCAGC TGCGGCTCAG GCCCGCGAAG AAAGGGCAGA ACGTCCTGAC
CGCGGTCCCC GGCCGGCCGG CGCACGCCCC GCAGGTCCCC GTCCCGGCGG TCCCCGTCAG
GGTGACTCGC GTCCCGGCGA TGGCCGTCCC GCACCCCGCT CCGGCGCTCC GCGTCCGGGT
GGTGCCCGCC CCGCGGCCGG TTTCGGACAG CCCGCTCAGG CCGAAAATTC TTCTCCCTTT
GCCGACGGAC AAAGCAAGAA GAAACGCCAG AAAGGCCGCC GTACGGTGGA ATTCGGCGAC
AAGGGCGCAG GCGGCAAAAA AATGCGCGAA GATGTGGGCG GCAACTGGAA CCGCGGCAAA
AAGGGCAAAC GCAAGCCCGA AACAAAGCCC GTGTCCACGC AGCCCCAGCG CGCGGCCAAG
CGTAAAATCA AAGTGGATGA AGCTATCCGC GTGTCCGATT TTGCCCACCA GATGGGTGTA
AAGGCACCGG AAATAATAAA AATTCTGATG TCGCTGGGCA TTATGGCCAC CATCAACCAG
TCGCTGGATA TCGACACCGC GACTGTGGTT GCCGCAGAAT TCGGTTACGA AGTGGAAAAG
GTGGGCTTCT CTGAAGATGA GTTCCTCCTG CCCAAGGAAG TGGATGCCGA CGAACTGCTG
CTGCCCCGTC CCCCTGTTGT CACCATCATG GGGCACGTTG ACCACGGCAA GACGTCGCTG
CTCGACGCCA TCCGCAAATC CAGTGTCACC ACCGGTGAAG CGGGCGGCAT CACGCAGCAC
ATCGGCGCAT ACCACGTAAG CACCAAGCGC GGCGACATCG TGTTTCTTGA CACCCCCGGT
CACGAGGCGT TCACCGCCAT GCGTGCCCGC GGTGCACAGG TGACCGACCT TGTCATTCTG
GTGGTTGCCG CGGACGACGG CGTGATGGAA CAGACCCGTG AAGCCATCAG CCACGCCAAG
GCCGCAGGTG TGCCCATCGT GGTTGCCGTG AACAAAATAG ACAAGGAAGG CGCCAACAGA
GACCGCGTAA TGCGTGAACT GGCGGAGCAG GACCTTGTGC CCGAAGAATG GGGCGGCGAC
ACCATTTTCT CGTATGTTTC GGCCAAGACC CGCGAAGGTC TGGACGATCT GCTGGAAATG
CTGGCACTGC AGGCCGAAGT TCTGGAACTG AAAGCCAACC CCGACAAGCC CGCACGCGGA
CGCATTGTGG AAGCCAAACT GGACAAGGGC CGCGGTGCCG TGGGTACCGT GCTCATTCAG
GAAGGCACGC TGAAACACGG CGACGCATTT GTCTGCGGCG TTTTCAGCGG GCGTGTGCGC
GCCATGTTCA ATGATCAGGG TAAAAAAGCC AAGCAGGCAG GCCCCTCCAT TCCTGTCGAA
GTGCAGGGAT TTGAAGGCGT ACCTGTGGCA GGTGAAGAGT TCATCTGCGT CAAGGATGAA
AAGGTTGCCC GCCGCATTGC AGAACAGCGC GCCATCAAAC AGCGCGAACG CGATCTGGCA
CGCGAAAGCA AGGTCACCCT GGAAACATTC CTTGCACGGC GCAAAACCGA TGCCGAAACG
CAGACCCTCA ACCTCGTGCT CAAGGCCGAC GTGCAGGGTT CCGTGGGCGC CATCACCGAT
GCGCTGCGTA AAATGCAGAC CGAAAAAGTC AAAGTGGACA TCATCCACAG CGGCGCCGGT
GCCATCACCG AATCCGATAT TCTGCTGGCT TCCGCTTCGG ACGCCATCAT CATCGGCTTC
AACGTGCGCC CCACCGCCAA AGTGAAGGAT GTGGCCGAGC AGGAAAAGGT GGAAATCCGC
TTCTACGACA TCATTTACAA GCTGTCGGAA GAAATCAAAT CCGCCATGGC CGGTCTGCTG
GCCCCTGTGG TCAGAGAACA GTACCTCGGT CAGGCCGAAG TGCGCGAAAC CTTCAGCGTG
CCCAAGGTGG GAACCGTTGC CGGCTGCCAT GTGGCCGACG GCAAGATCAT CCGCAACACC
AAGGTGCGCC TGCTGCGCGA CGGCGTGGTC ATCTACACCG GACGCATCAA CTCGCTCAAG
CGCTTCAAGG ACGACGTCAA GGAAGTTGCC AAGGGCTTTG AATGCGGCAT GGGTCTTGAA
AACTACAACG ACATCAAGAT AGGCGACATC ATCGAAGCCT TTGAAGAAGT CGAAGAAGCA
GCGACCCTCG ATTAA
 
Protein sequence
MSETKIKIKD LATELNIAPK EVLAAAKKLD IPAKNATSTL TTEEARKVRG QVQEASGDAR 
RKDGASDVII RRRRKGSGAK PAAREEAAPA ETEAQASPAQ PEAKAAAPAA EAEEAPAAKP
APAKARKAEA RTEAPRARII RPATPQAEEK AEPAPETAAP AQPAPEAQSA APEKVEAHDA
GAPVQQAETT ESAPAEPAAE KAPAEKRRYE VSMEPEKDSV QADTEADGDA DGGRKKKKKK
KREETAGPQV RVISRPDPAA VQAQAAAAAQ AREERAERPD RGPRPAGARP AGPRPGGPRQ
GDSRPGDGRP APRSGAPRPG GARPAAGFGQ PAQAENSSPF ADGQSKKKRQ KGRRTVEFGD
KGAGGKKMRE DVGGNWNRGK KGKRKPETKP VSTQPQRAAK RKIKVDEAIR VSDFAHQMGV
KAPEIIKILM SLGIMATINQ SLDIDTATVV AAEFGYEVEK VGFSEDEFLL PKEVDADELL
LPRPPVVTIM GHVDHGKTSL LDAIRKSSVT TGEAGGITQH IGAYHVSTKR GDIVFLDTPG
HEAFTAMRAR GAQVTDLVIL VVAADDGVME QTREAISHAK AAGVPIVVAV NKIDKEGANR
DRVMRELAEQ DLVPEEWGGD TIFSYVSAKT REGLDDLLEM LALQAEVLEL KANPDKPARG
RIVEAKLDKG RGAVGTVLIQ EGTLKHGDAF VCGVFSGRVR AMFNDQGKKA KQAGPSIPVE
VQGFEGVPVA GEEFICVKDE KVARRIAEQR AIKQRERDLA RESKVTLETF LARRKTDAET
QTLNLVLKAD VQGSVGAITD ALRKMQTEKV KVDIIHSGAG AITESDILLA SASDAIIIGF
NVRPTAKVKD VAEQEKVEIR FYDIIYKLSE EIKSAMAGLL APVVREQYLG QAEVRETFSV
PKVGTVAGCH VADGKIIRNT KVRLLRDGVV IYTGRINSLK RFKDDVKEVA KGFECGMGLE
NYNDIKIGDI IEAFEEVEEA ATLD