Gene Dde_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3160 
Symbol 
ID3758135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3146501 
End bp3147022 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content56% 
IMG OID637784071 
Producthypothetical protein 
Protein accessionYP_389649 
Protein GI78358200 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000242539 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATGA CCGTCACAAC AATTCACGAA CAACTGCTGG AAATCATCAC CCCCGTCATC 
CGGTCCTTCG ACCTTGAGTT GTGGGGCATG GACTTTATTC AGGGCGGCAA GGCCGTTCTG
CGTATATATA TTGACGGACC CGACGGCGTT ACCATCGACC AGTGCGCCAC TGTCTCGCGG
CATATCGGGC TGGCACTGGA AGTCGAAGAC ATCATTGCCG GGGCTTACAA CCTCGAGGTG
TCGTCCCCGG GACTGGAACG GCCTTTGTTC AGCGCGGCAC AGCTTGCCGC CTATAAAGGA
CACAAGGCAG AACTGGTGCT GCGCGCCCCC TGTGCGCAGT TTCCCGGACG GAAAAAATTT
ACCGGCGTTG TCGGAAACGT GGAAGGCGAA AACTTCACTC TGCAGATAGA CCCGCTGAAA
GGCGGCGACA ACCTGCAGGA AGAACTCAGC GCGCACTGGG ACGATGTGAA AAAAGCCAGA
CTGATCTACG ATTTTGACAG CGAAAAAGGC CAGAAGCGCT AA
 
Protein sequence
MHMTVTTIHE QLLEIITPVI RSFDLELWGM DFIQGGKAVL RIYIDGPDGV TIDQCATVSR 
HIGLALEVED IIAGAYNLEV SSPGLERPLF SAAQLAAYKG HKAELVLRAP CAQFPGRKKF
TGVVGNVEGE NFTLQIDPLK GGDNLQEELS AHWDDVKKAR LIYDFDSEKG QKR