Gene Dde_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3139 
Symbol 
ID3758114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3130537 
End bp3130944 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content56% 
IMG OID637784050 
Producthypothetical protein 
Protein accessionYP_389628 
Protein GI78358179 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA CATTTCAGGG AGATGGAATT TTTCCCAAGG GGCCGGAAAA CAAATCTTAT 
GCACAGTATT TTACCGGGAC TAGCTATCTG GAAATACTGT CTGCTGAAGG CGTTGTCATC
GGTAACGTCA CCTTTGAACC GGGCTGCCGC AACTTCTGGC ATATCCACCG CAAGGGTGGT
CAGGTTCTGC TCGTGACCGG CGGCCGCGGC TGGTATCAGG AAGAAGGGAA ACCCGCGCAG
GAGCTGCGTG CCGGAGACGT TGTGAATATT CCGCCGGATA CCAAGCACTG GCACGGTGCC
GCCAGAGATA GCTGGTTTGC CCATCTCGCC GTGGAAGTGC CTGCGGAGGG GAGATCCAAC
GAATGGCTGG AACCTGTTTC CGACGAGGAA TACAACGCGC TCAGCTAA
 
Protein sequence
MNTTFQGDGI FPKGPENKSY AQYFTGTSYL EILSAEGVVI GNVTFEPGCR NFWHIHRKGG 
QVLLVTGGRG WYQEEGKPAQ ELRAGDVVNI PPDTKHWHGA ARDSWFAHLA VEVPAEGRSN
EWLEPVSDEE YNALS