Gene Dde_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3138 
Symbol 
ID3758113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3129460 
End bp3130416 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content51% 
IMG OID637784049 
Productmembrane protein 
Protein accessionYP_389627 
Protein GI78358178 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGGG ACAAAACGTT CAAGCCAAGT GCACAAGTAC TTCATAAAAA AGTCATCTAT 
CCCAACAGAT ACGGGATTCT CATCTCTGCC GACATGTACA TGCCGCGTAC TATGGACCCA
AACCGGCAGC TTCCGGCGCT CATTGTCGGC ACACCCTACG GCGGAGTGAA GGAACAAGGC
GCAGGTATCT ACGCACAGAC CATGGCGGAA CGCGGCTTTG TAGCCATTGC GTTTGACGAA
TCCTTTAACG GCGAAAGCGG CGGCAACCCC AGACACATAT CCTCTCCTGA AATTTTTACG
GAGGACTTCA GTGCGGGCGT TGATTTTTTG GGCACAACAC CTTTTGTGGA CAGAGAAAAA
ATCGGCGTCA TAGGAATCTG CGGCAGCGGA GCATTTGCCC TTAAAGCCGC ACAGGCTGAC
CGCCGGATTA AAGCCGTCGC GACCGCCAGC ATGTATGACA TGAGTCGGGT AACCAGGTAC
GGTTGGCTTG ATTCTTTGTC GGACGAAGAA CGCAATACAA TGCTGGATGA ACTCGGAATG
CAACGCTGGA AAGATTTTGA GAGCAAAGCA CCACTACTGC CGGCAGGCTT TCCGGACACC
CCAAGCGATT CGATCCCGCA GGGACTGGAC CCCATAAGCA GTGAGTTCTG GGAATACTAC
GCCATGAAGC GGGGGCATCA TCCCCGTTCA CACGGACCGT TTACAGTAAC AAGCAACATG
GCTTTCATAA ACTTCCCTCT GCTGGATTTC ATCGAAACAA TATCGCCCCG CCCTATTCTG
TTCATTATCG GCGAAAAGGC ACACTCGCGT TACTTTACAG AAGACGCTTA CAAAATGGCT
GAAGAACCGA AAGAGCTCTT TATCGTTCCC GAAGCAAGAC ATATCGACCT GTACGACCGC
ATGGACATAA TTCCTTTTGG CAAACTGGAT GACTTTTTCA AAAAAGCCCT TGGGTAA
 
Protein sequence
MTWDKTFKPS AQVLHKKVIY PNRYGILISA DMYMPRTMDP NRQLPALIVG TPYGGVKEQG 
AGIYAQTMAE RGFVAIAFDE SFNGESGGNP RHISSPEIFT EDFSAGVDFL GTTPFVDREK
IGVIGICGSG AFALKAAQAD RRIKAVATAS MYDMSRVTRY GWLDSLSDEE RNTMLDELGM
QRWKDFESKA PLLPAGFPDT PSDSIPQGLD PISSEFWEYY AMKRGHHPRS HGPFTVTSNM
AFINFPLLDF IETISPRPIL FIIGEKAHSR YFTEDAYKMA EEPKELFIVP EARHIDLYDR
MDIIPFGKLD DFFKKALG