| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3137 |
|---|
| Symbol | |
|---|
| ID | 3758112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3128276 |
|---|
| End bp | 3129160 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637784048 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_389626 |
|---|
| Protein GI | 78358177 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGTA TGGTGAAACT GCTTGATGAG ATTGCCGGTG TCGACGGCGG CGTTGTTGAG
TCCAGGCTTC CAGGTGTCCG TTTTTTTAAG GAGACAAGGC ATGTAGCACG CAGGCCGATG
CTGTATAATC CTGGAATATG TATAGTCGTA TCAGGACATA AAGTGGCGTA TGTCGGCGGT
CAGACTTTCA GATACGATGT GGATAACTAT CTTGTGACTT CGGTCGCCAT GCCGTTTGAG
TGCGAATCCT TTCCCAGTCA GGAAAACCCG TTACTGGGGA TGTTTATCGA CATTGACATC
GGGCAGCTGA ATAATCTGAT AAGTATGATG GAAAGGCAGG ATAATCCGTC TGTGGCAGTT
TCTAACGGGC GGCAGCTTGC CATTGGCCCT TCGGCTATGG ACGCGGATAT GAAAGACGCT
GCTGTGAAGT TGGTTAAAGC ACTGCAGAGT GAACAGGAAG CCAGAATACT GGGGCCGGGG
CTGGTACGCG AGGTGTATTA CAGAGCATTA TGCGGAAATC AGGCTCCCGT GTTGTATTCT
CTTGTGCGGG GAAGCGGTTC TTTTTCGCAG GTGGCCAGAA TTATACACAT GATGGAAGGC
AGCTACTCTG AAAAATTTGA TATTCAGCAG CTTGCAGATT CCGTGCATAT GAGTGTTTCT
GCTTTTCATA AGGCGTTCAA GGATATTACG GCAGATTCGC CGTTGCAGTA TTTAAAGAAA
ATACGACTTT CGCGCGCCAG AGACCTTATC GTCCAGCAGG GAATGAAAGC TTATCTGGCA
GCAGATGAGG TCGGATACGA AAGTCCGTCT CAGTTCAGCC GCGAATTCAA ACGTTATTTC
GGGCGCAGTC CCGCAGAGCT AATGCGTGAT GTCCGTTCAT CGTAG
|
|---|
| Protein sequence | MSGMVKLLDE IAGVDGGVVE SRLPGVRFFK ETRHVARRPM LYNPGICIVV SGHKVAYVGG
QTFRYDVDNY LVTSVAMPFE CESFPSQENP LLGMFIDIDI GQLNNLISMM ERQDNPSVAV
SNGRQLAIGP SAMDADMKDA AVKLVKALQS EQEARILGPG LVREVYYRAL CGNQAPVLYS
LVRGSGSFSQ VARIIHMMEG SYSEKFDIQQ LADSVHMSVS AFHKAFKDIT ADSPLQYLKK
IRLSRARDLI VQQGMKAYLA ADEVGYESPS QFSREFKRYF GRSPAELMRD VRSS
|
|---|
| |