Gene Dde_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3127 
Symbol 
ID3758101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3120322 
End bp3120885 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content55% 
IMG OID637784037 
ProductTetR family transcriptional regulator 
Protein accessionYP_389616 
Protein GI78358167 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAT CGAAACACCT GATACTGGAA AACGCCCGGC GGTTGTTTTC CGAAAACGGC 
TTCAAGGGCA CAACCATCGC CCAGATAGCC AAGACGTCCA ATGTGACGGA CGCCGCGATA 
TACAGACACT ACCGGTCCAA GCAGCAGATT TTCGACAGCA TCATCAACGA TTTTTTTGAT 
GAGTTCAGCG GGCTGATGGA CAGCATCCAC GAGCGCCAGA AAAGCGGCTA CTGCCTTATC 
GAGACTCTGA TTCTCGATCT GGATGCCTTT CTGGACGAGC GCGTGGTCGA GCTGAAGGTC 
ATCATGAACA CATATACCAT CATGCCCAGC GCGCGGCAGA TAATGGAACG CATGTACGCC 
CTGCTGGGGC TTACTCTTGA ACGCTGCCTT GAAAAAGGCA TGCGCGACGG GACAGTGCGC 
GATGATCTGG ATATTACGCC CACGGCGTCG CTTATTGCCG TCATGCTGAT GGGCATGAGC 
CGTCGCCAGC TGTACTGGCC GGAAACACCC AATCTGGCGC AGGAGGCGGT GACTTTCTGC 
CAGCGGAGTA TCCGCAGCCT TTAA
 
Protein sequence
MASSKHLILE NARRLFSENG FKGTTIAQIA KTSNVTDAAI YRHYRSKQQI FDSIINDFFD 
EFSGLMDSIH ERQKSGYCLI ETLILDLDAF LDERVVELKV IMNTYTIMPS ARQIMERMYA 
LLGLTLERCL EKGMRDGTVR DDLDITPTAS LIAVMLMGMS RRQLYWPETP NLAQEAVTFC 
QRSIRSL