| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3126 |
|---|
| Symbol | |
|---|
| ID | 3758100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 3119062 |
|---|
| End bp | 3120231 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637784036 |
|---|
| Product | alcohol dehydrogenase, iron-containing |
|---|
| Protein accession | YP_389615 |
|---|
| Protein GI | 78358166 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACT TCATATACCA CGCGCCCACG CGCATCGTCT TCGGCAGAAA TACCGTATCG
CAAACCGGTG CGGAACTGGC GGCACACAAT GTGCGCCGCA CGCTGCTGGT CACCGGCGGC
AGCGCCGCCA TGCGTACCGG AGCATACGCA CAGGTCACGG CTTCACTGGA CGGGGCCGGT
GTGATGCATA CGCTTTTCAG CGGTGTCACG CCCAATCCTT CCCTTGATCT TGTGGAAAAA
GGCATAGCCG CCGCACACGC GTTTGCGGTG GACAGCGTGC TGGCCATCGG CGGCGGCAGT
GTCATAGACT GCGCCAAAGC CATTGCCGCC GGTGTTTTTC TAGAAGATTA CTGGGCACAG
GTGGAAACAC GGCGTCCCGT CACACAGGCT CTGCCTGTAT TCACGGTGCT CACTCTTTCG
GGCACCGGTT CGGAAATGAA CGAAAAAGCC GTCATCACCA ACGAACCGCT GGCCAGAAAA
TGGTCGCTGA GCGGCCTGTG CCTGTGCCCC AGAGTATCCA TCATCGACCC GCAGCTCCAG
TCCTCCGTTC CGTGGCATCT GACCGCCGCG GGCGGCATCG ATGCCATGAC CCATGTGATG
GAAAACTACT TCCGCGGCAG AACGGCCCGC GCAGCCACCG GTTACTTTCA GGAAGAGACA
ACTCTGCAGC TGTGCGAGGG AATCCTGCGC GCCATCATCA TGTCACTGGA TGAACTGCAG
CGCGACGGCT CGGACTATAC CGCGCGGGCC AATCTGGCAT GGGCAGCCAG CTGGGGGCTT
AACGGCCTTT CAGGCTCGGG GCTTTCCGGC GGCGACTGGA CTTCGCACGC TCTGGAACAC
GCCCTGAGCG GACTGCACCC GCAGGTTCCC CACGGTGAAG GACTGGCGGT GATTTTCCCC
TCGTGGATGG AGCAGGTCTG CCACAGCGTG CCGGACATCT TCACGCGTTT TGCCCGCACC
ATATGGGGTG TTTCCACAGC GGAAGAAGGA GTGGCCGCAA CCCGTCAGGC ATTCTCGCGC
TGGGGGGCTC CCGACCGTCT GTCCCGCTGG AGCATTCCCG CATCCGACAT TCCCCGTATG
GTACAGAATG CCCTGAGCTA CCGCGCGCTG GGCAGAATAG TGCCTCTTTC GGCAGAAGAT
GTGACCAGCA TATACACGCG GGTGCTCTGA
|
|---|
| Protein sequence | MDNFIYHAPT RIVFGRNTVS QTGAELAAHN VRRTLLVTGG SAAMRTGAYA QVTASLDGAG
VMHTLFSGVT PNPSLDLVEK GIAAAHAFAV DSVLAIGGGS VIDCAKAIAA GVFLEDYWAQ
VETRRPVTQA LPVFTVLTLS GTGSEMNEKA VITNEPLARK WSLSGLCLCP RVSIIDPQLQ
SSVPWHLTAA GGIDAMTHVM ENYFRGRTAR AATGYFQEET TLQLCEGILR AIIMSLDELQ
RDGSDYTARA NLAWAASWGL NGLSGSGLSG GDWTSHALEH ALSGLHPQVP HGEGLAVIFP
SWMEQVCHSV PDIFTRFART IWGVSTAEEG VAATRQAFSR WGAPDRLSRW SIPASDIPRM
VQNALSYRAL GRIVPLSAED VTSIYTRVL
|
|---|
| |