Gene Dde_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3112 
Symbol 
ID3758781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3101841 
End bp3102281 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content60% 
IMG OID637784022 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_389601 
Protein GI78358152 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.176237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT CTGCCCGCAC CAGATACGCC ACACGCCTGC TGCTTGACCT TGCCCTGCAC 
GACGACAATA CCCCCCGCAG GGCGTCCATG CTTTCGCAAA GCACCGGTGT GACCGTCCAG
TTTATCGAGC AGATACTGAA ACCCCTGAAA AAAGAAGGGC TGGTAACCAG CGTGCGGGGT
GCCGCCGGCG GACACCTGCT GGCCGCAGAC CCTCAGGAAC TGACACTGGG GCACATTGTG
CGCGTGATGG AAGGGGGTAT CCACATGACC GAGTGCAGCC GGGACGAAAC AGCCTGTGAA
CGCGCGCACC AGTGCAGAAC ACGGCAGGTG TGGATCAGGA TATCCAGAGC CATGGAACAG
GAACTGGAAG CAATCACACT TTCGGACCTC ATGCAGGATG CTTCCATCAT CGCATCATCA
CCGGCCGACC GCCGCGGCTG A
 
Protein sequence
MKLSARTRYA TRLLLDLALH DDNTPRRASM LSQSTGVTVQ FIEQILKPLK KEGLVTSVRG 
AAGGHLLAAD PQELTLGHIV RVMEGGIHMT ECSRDETACE RAHQCRTRQV WIRISRAMEQ
ELEAITLSDL MQDASIIASS PADRRG