Gene Dde_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3106 
Symbol 
ID3758775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3096652 
End bp3097590 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content64% 
IMG OID637784016 
Productiron compound ABC transporter, periplasmic iron compount-binding protein, putative 
Protein accessionYP_389595 
Protein GI78358146 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCT TCCGACATCT CAGCGCCGCG CTGTGGTGCG CCTTTGCCCT GCTGCTGGCA 
CCTTTGTCCG TTGCCGCGCA GCAGCACGCA GTAAGCATAA CCGACGATAC AGGCCGCACC
GTGCAGCTGG ATGCTCCTGC CCGGCGCATC ATCGCCCTGT ACGGTGCCTT TAACGAGACA
CTGGCCGCCA TGGGCCTGCA GGACAGGCTC ATAGCACGCA CCAATGCCGA CCACTGGCCG
GAATCCATCC GCAGCCTGCC CGCCATCGGC ACGCACATGC GGCCCAACCT TGAACTGGTG
GCCGGCATGG CTCCCGACCT TGTGCTGCAG ATGAGCGGAC GCAAAGAAGC CGGGCAGGCC
GTGGACGACC TGCGCGCGCT GGGCATTCCC GTGGCGGAAT TTCACGTTGC CGACTTTGAG
CAGCTGTTTT CCGTCATCGC CCGTCTGGGA GTGCTGACCG GAGAACAGGG CAAGGCAGCG
GCACTTACCG CACAGTTGCG CAACCGTCTG GAAACGGTGC GCGCAGCCGT AGCCGGAGAA
CACCGCCCCT CGGTCTTTTT TGAAGTCCGT TACCCCAACC TGCTGGGGGC GGGCACAGGT
TCCATCGTCA ATGACATTAT CGGCCGCGCA GGCGGTGCAA ACTGCCTCGT GTCCGACAAA
AAACTGGAGC GCCCCTCGGA AGAGGAACTG CTGCGCCTCG ACCCCGAAGT CTACATTGTG
CAGCACGGCC CCATGAATAA AACACCGGTG CCGCCGGACG CGCGGCCGCA CTTCCGCACA
CTGCGGGCGG TGCGTCATGC GCGCTGGCTT GTTGTGGAAG AGGCGTGTTA TTCACGCCCC
GGCCCCAGAG CGGTGGATGC GGTGGAAGAG CTTGCGCGCT TTCTGCATCC CTCGCGCTTC
ACCCTGCAGC CCCCGGCTGC CGGTCAAGGA GAACCCTAG
 
Protein sequence
MTTFRHLSAA LWCAFALLLA PLSVAAQQHA VSITDDTGRT VQLDAPARRI IALYGAFNET 
LAAMGLQDRL IARTNADHWP ESIRSLPAIG THMRPNLELV AGMAPDLVLQ MSGRKEAGQA
VDDLRALGIP VAEFHVADFE QLFSVIARLG VLTGEQGKAA ALTAQLRNRL ETVRAAVAGE
HRPSVFFEVR YPNLLGAGTG SIVNDIIGRA GGANCLVSDK KLERPSEEEL LRLDPEVYIV
QHGPMNKTPV PPDARPHFRT LRAVRHARWL VVEEACYSRP GPRAVDAVEE LARFLHPSRF
TLQPPAAGQG EP