Gene Dde_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3104 
Symbol 
ID3758773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3094752 
End bp3095831 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content65% 
IMG OID637784014 
Productiron compound ABC transporter, permease protein 
Protein accessionYP_389593 
Protein GI78358144 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGGG CCGGAAACAC CGTAACACGC CGCACGCTCC GCCCGGTGCT GTGCTGTGCC 
GCCGCGTCGG CCGCCTGTGC GGTTTCGGTG TTTCTGGCCT GTTACGCGGG GGCGTTTCCC
GTGGCGTTTG CCGACGTGAC GGCCGTGCTG CTGCATGCCG CCGGTCTGGG CCCCCTGCCC
GCAGCCGCGC AGGATAATCC CGCCCTGACC GTTGTGGTGC TTGAGCTGCG TCTGGGCCGC
GTGGTGCTTT CGCTGCTGGT GGGCGCTTCG CTGGCGGTGG CAGGCACGGT GTATCAGGGG
CTGCTGCGCA ACCCTCTGGC CGATCCTTTC ACGCTGGGCG TTTCGTCCGG AGCCGCTTTC
GGCGCATCCG TGGCACTTTT CTGGGGGCTG GGCACCATGG CCCTGCCGTT TTTTCCCGCT
GCGGGAATAC TGCCCGCCGC GGCCCTGACC GGCGCCACCG CGGCGCTGGC GGCCGTGCTT
GTACTGGGTC GCGTGGGCGG CATCATGCGC CGCGAAACGC TGGTACTTGC GGGTATTGTG
GTTTCCACGT TCCTTTCCGC TCTCATATCG CTGGTCAAAT CACTGGACGA AGAATCGGTG
GCAAGCATCG TATTCTGGAT AATGGGCAGT CTGCAGGGCC GCGGCTGGCA TGAGGTCATG
CTTTTCACGC CGTGGTTTGT GCTGGGTATG CTGCCCGTCA TCCGTTTTTC GCGCGAGCTT
GATATTCTGT CGCTGGGCGA CGTGCAGGCA CGTCAGCTGG GCATGGATGC TTCACGCGTA
CGGTTGTGGC TGCTGCTGGG AGCAGGAGCG CTTACGGGCG TCTCCGTGGC TGTCAGCGGG
GTGATAGGAT TTGTGGGGCT GGTTGTGCCG CATCTGGTAC GTATGGTCAT AGGCGCCGAG
CACCGGCCTC TGCTGGCGGT CAGCGCGCTG ACAGGCGGTC TTTTGCTGCT CTGGTCCGAC
GTGCTGGCCC GCACCCTGCT TTCCGGCGGG GCCGAACTGC CCGTGGGAGT GGTCACCGCG
CTGCTGGGGG GCCCTTTTTT CTGCCTGCTG CTGCGGCGCA ATACAGGAAC AGCCCTATGA
 
Protein sequence
MNRAGNTVTR RTLRPVLCCA AASAACAVSV FLACYAGAFP VAFADVTAVL LHAAGLGPLP 
AAAQDNPALT VVVLELRLGR VVLSLLVGAS LAVAGTVYQG LLRNPLADPF TLGVSSGAAF
GASVALFWGL GTMALPFFPA AGILPAAALT GATAALAAVL VLGRVGGIMR RETLVLAGIV
VSTFLSALIS LVKSLDEESV ASIVFWIMGS LQGRGWHEVM LFTPWFVLGM LPVIRFSREL
DILSLGDVQA RQLGMDASRV RLWLLLGAGA LTGVSVAVSG VIGFVGLVVP HLVRMVIGAE
HRPLLAVSAL TGGLLLLWSD VLARTLLSGG AELPVGVVTA LLGGPFFCLL LRRNTGTAL