Gene Dde_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3101 
Symbol 
ID3758095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3089981 
End bp3092254 
Gene Length2274 bp 
Protein Length757 aa 
Translation table11 
GC content63% 
IMG OID637784011 
Producthypothetical protein 
Protein accessionYP_389590 
Protein GI78358141 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCA GATTCATACC TTCTGACAGG CCGGCGGGCA ACCGGCTTTG CGTCATTTTT 
GCTCTGGCCG CTCTTTTTCT TGTGCTGCTG CCCGCGGCCG CTGCCGCAGA GAACGGGCGG
GTGCTTGTGC TCAACTCCTA CCACAGGGGC TTCCAGTGGT CCGATGCTGA AATGTCGGGC
ATCGAATCAT GGTTCGTTGA TTCTGACATC AAGCCGCAGC TGCATTTTGA ATATATGGAT
TCCAAACGGA TGGCGCCCGA TGTGGCCACC CGTCATATGT TTGTCCTGCT GCGCGAAAAA
TATTCCAGAG ACTATTTCGA CGTGCTCATG GCGGCCGATG ACAACGCCTT TGAATTGCTG
CGGGCGCACC GTCAGACGCT TTTTCCGGGG GTGCCGCTTG TTTTTTGCGG GGTAAACCTG
CAGCACATGC CGCGCGGCAG CATGCCGGAA CGCACCACGG GAGTGCTGGA AAGGGTGGAT
GTGGAGGGTA CGCTTTCGCT GGCGCTTTCC ATGCATCCGG CCACCCGCAG CGTGGTGTTT
GTGGCCGACG GCACCACGAC GGGGCAGCGC ATGCTGCATG CCGCACGCGA GGCACGCAGA
GGCTTTGCGG GACGGGTGGA TTTTACCGAG CTGAACAACC TGCCTGCCCC CAAGCTGCAG
GAAGCTCTGC GCCTGCTGCC TTCATCGTCT GTCGTGGTGC TGCTCAGTTT TCTGCGCGAC
CGCAACGGCA GGGTGCTTAC GGTGGAAGAA TGCGTCCGGC TGCTTACGCA GGCTTCTCCT
GTTCCCGTGT ACGGAGTGGG AGCGCAGTTC ATCGCCGCAG GGCTTGCGGG CGGCACGCAG
CTTTCGGGTA CCGAGCACGG GAGGCAGGCG GCACGGCTGG CGGAGCAGAT TCTGCGCGGG
GCCGACCCCT CAGAGTTGTC CATAATTGCG GAAACCCCTG TGACGGCGGT GCTTGACTAC
CGACAGCTTT CGCGTTTCGG GGTGTCTCTG CCCGACCTGC CCGATGGTGT GATAGTGCGT
AACCTGCCGC AGGGCAGTCC TTCTGTGTGG TGGTACGGCG CGGGGCTGGC AGCTGCTGCC
GCCATGGCGC TGTTGTTCAG GCACTGGCGC AACCGGCGGT GCATGCCCGC CTGCGAAGAT
TCGGCAACGG CCCTTGGCGG GGTGCTGGCA GCCATGCAGC ATATGAACGA TATCTGTCTG
CTGCTTGATA CCGCCGGCCG CATAGCGGCC ATGAACCGTC CGGCGGAACA GGCATCGGGC
ATTGATTCGC ATGCGGCGGA GGGAATGCTG CCCGAGGCCG TGCTGCCCAT GCTTGCCGGT
GCGCTTGAAA AGCTCAGGCG CGGGCTGCAG CACAATGACG AATTTTGCCT GCTGCAGGCC
GAAGCCCGCA TGGATAACGG GCTGCGCCGG TTTGATCTGG AAGCGTCGAG CCTGCTGCCT
GTTGCCGCCG GCGCGTTGCT GGTGCTGCGC GATGTGACAG ACAGAGCCGT TCTGGAGGCT
GCAGCCGTGG GGGTGCACCG TCTTTCGCTG GTTACCAGAA TGGTGTCGGG CATGTGTCAC
GGAGCAAAGG AACCGCTTTC TGCCGTGGTG CAGAATGCCG AAGAGCTGCA CGAGGTGCTG
TTTGAAGACA CCGAGGGTAA TGCCAGAGCT GCAGCGCGCT GCGGGTGCAG CCTGAGTGCG
CTGCGCGGTT ATCTGGGTGA GCGGGATGTG CCCCGGCGTG TCGGTCTGCT GCGGGCCGCC
GGTGCGGAGC TTACGGGCAT AGTGTCCAGA CTGCCCAATG CGGAACGGCG CAGTCCTGAA
CGGCCCATGC CGCTCAAGGA TGTGGTGGAC AACGCCCTGC GTCTGGGCAG GGACGACCCG
CGCCTGCGTG AGTACGGTAT GGGGCGCGTG GGCTGGCGCA TCGAGGCGGA CGGCGCGGAC
TCTGTGCAGA TAATCAGGGC GGCGGATGCG GAACTTGTGG TATATGAGAT GATAACCCTC
GGGCTGTATG CCCTGATGTC GGGAGAGGCT TCTCCCGGGG GGGTGCTGGT GCAGTACGGG
GCAACCCCCC GCGGAGGGCG GGTGGTGCTG ACCGCTTCGG GCTGCAGCCG CCCCGTGGAT
ATCGCCAAAC TGCTGCGCAG CGAGCGTATG TTCGGCGGCA GCGGTGGTGA GATGAGCGGA
TACGAGGGGT TTGCTCTTGC CACGCGCATT GCGGAGCACA GATTTGGCGC CCCGCTGAAA
GTTGAATCGC CGGAAAACGA TGTGCGCATC GAATTCATGC TGAATCAGGA GTAG
 
Protein sequence
MKTRFIPSDR PAGNRLCVIF ALAALFLVLL PAAAAAENGR VLVLNSYHRG FQWSDAEMSG 
IESWFVDSDI KPQLHFEYMD SKRMAPDVAT RHMFVLLREK YSRDYFDVLM AADDNAFELL
RAHRQTLFPG VPLVFCGVNL QHMPRGSMPE RTTGVLERVD VEGTLSLALS MHPATRSVVF
VADGTTTGQR MLHAAREARR GFAGRVDFTE LNNLPAPKLQ EALRLLPSSS VVVLLSFLRD
RNGRVLTVEE CVRLLTQASP VPVYGVGAQF IAAGLAGGTQ LSGTEHGRQA ARLAEQILRG
ADPSELSIIA ETPVTAVLDY RQLSRFGVSL PDLPDGVIVR NLPQGSPSVW WYGAGLAAAA
AMALLFRHWR NRRCMPACED SATALGGVLA AMQHMNDICL LLDTAGRIAA MNRPAEQASG
IDSHAAEGML PEAVLPMLAG ALEKLRRGLQ HNDEFCLLQA EARMDNGLRR FDLEASSLLP
VAAGALLVLR DVTDRAVLEA AAVGVHRLSL VTRMVSGMCH GAKEPLSAVV QNAEELHEVL
FEDTEGNARA AARCGCSLSA LRGYLGERDV PRRVGLLRAA GAELTGIVSR LPNAERRSPE
RPMPLKDVVD NALRLGRDDP RLREYGMGRV GWRIEADGAD SVQIIRAADA ELVVYEMITL
GLYALMSGEA SPGGVLVQYG ATPRGGRVVL TASGCSRPVD IAKLLRSERM FGGSGGEMSG
YEGFALATRI AEHRFGAPLK VESPENDVRI EFMLNQE