Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3070 |
Symbol | |
ID | 3758064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3061411 |
End bp | 3062232 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637783980 |
Product | extracellular solute-binding protein |
Protein accession | YP_389559 |
Protein GI | 78358110 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.966648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGGA TGCTGACTGC GGCGGTTGCC GCCGTGCTGC TGCTTGGTCT GGCCGCCGGA GCCTGGGCCG ATGTGCGGCA GGAACTTACC CGGCAGAGCA CCATCGCCCG TGCGGTGGAC AGAGGCGTGC TGAAGGTGGG GTTTTCCACG TTTGTTCCGT GGGCCATGAA AGACAAGCAG GGTGAGTTCA TCGGGTTCGA GGTGGATGTG GCCAGACGTC TGGCAGCTGA TCTCGGGCTG GAAGTGCAGT TTGTGCCCAC CAAATGGTCG GGCATCATAC CCGCGCTGCT TACGGGCAAA TTTGATGTGA TTATCGGCGG CATGAGTGTG AAGCCGGACA GAAATATTTC CGTCAACTTC ACTATTCCCT ATGATTATGC CGGTATGGCC GTCATGGCGC ACAAAGGGAA AGCCGCGGGC TTTTCGCGGC TGGAAGATTT TGACCGGGAG GACGTGGTTG TGGTGGCCCG TATAGGCACC ACGGCAGCTT CCGTGGCCAA AAAATATTTT CCTGCAGCGC AGGTGCGTCT GTTTGATGAC GAAGCGCAGG CGGTACAGGA ACTGCTTAAC GGACGTGCCC ACGCCATGGT TTCCAGCGCC CCGCTGCCTG CCTTTACCGT GCTGGAACAT CCCGACACGC TTTTTATGCC GGTGGAAGGA ACCTTTACCC GTGAGCCTGT GGGATTTGCC GTGCGTAAAG GCGACATAGA CACGCTGAAT GTGTTCAACA ACTGGATACG CATGGTCGAA TCAGAAGGCT GGCTGAAAGA GCGCAAGCAT TACTGGTTTG AAACAAAAGA CTGGGAAAGC AGGATTAAAT AA
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Protein sequence | MKRMLTAAVA AVLLLGLAAG AWADVRQELT RQSTIARAVD RGVLKVGFST FVPWAMKDKQ GEFIGFEVDV ARRLAADLGL EVQFVPTKWS GIIPALLTGK FDVIIGGMSV KPDRNISVNF TIPYDYAGMA VMAHKGKAAG FSRLEDFDRE DVVVVARIGT TAASVAKKYF PAAQVRLFDD EAQAVQELLN GRAHAMVSSA PLPAFTVLEH PDTLFMPVEG TFTREPVGFA VRKGDIDTLN VFNNWIRMVE SEGWLKERKH YWFETKDWES RIK
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