Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3060 |
Symbol | |
ID | 3758054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3051577 |
End bp | 3052572 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637783970 |
Product | NAD-dependent epimerase/dehydratase family protein |
Protein accession | YP_389549 |
Protein GI | 78358100 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0392933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAGG GAGAATTCAA AAATCTTGCC CGCAAGCGCA TTCTGGTAAC CGGCGGGGCG GGCTTCATCG GTTCGCACCT GTGCCGGGTG CTGCTCGACA GAGGTGCAGA GGTGCTGTGT GCGGACAACT ATTTCACCGG CAGCCGCGAC CATGTGCGCG ACCTGCTGGA TAACCCGCGC TTTGAGCTGC TGCGTCACGA CATCACCTTT CCGCTCTACA TAGAGGTGGA CGAAATATAC AATCTGGCCT GTCCGGCATC ACCGGTGCAT TACCAGTTTG ACCCCGTGCA GACCACAAAG ACATGCGTAC ACGGCAGCAT CAATATGCTG GGTCTTGCCA AACGGGTCAA AGCACGCATT CTGCAGGCAT CCACCAGCGA AGTGTACGGC GACCCGGAAA TACACCCCCA GCAGGAAGAC TACTGGGGGC GCGTGAACCC CATCGGGCCA CGGTCGTGCT ACGACGAAGG CAAGCGCTGC GCAGAAACGC TTTTTATGGA CTACCGGCGG CAACACGGTG TGGAAATCAA AATAGCCCGT ATTTTCAACA CCTACGGCCC CAACATGCAC CCGAATGACG GCAGGGTTGT GTCAAATTTC ATCCTGCAGG CACTGCAGCA CAAACCCATT ACCATTTACG GCGACGGCTC GCAGACGCGG TCATTCTGCT ATGTGGACGA TCTGGTGTCG GGCCTGCTGC GGCTGATGCA CAGCCCGGCC GATTTCTGCG GGCCGGTCAA TCTGGGCAAT CCCTCCGAAC GTACGGTGCT TGAACTTGCC GACAAAATCA TCACCCTCAC CGGCTCGCGT TCCGAACTTG TATTCAAACC GCTGCCCGCA GACGACCCGC AGCGCCGCAG ACCGGACATA AGCATGGCCC GCCGTCATCT GGAATGGGAA CCCGCCGTGG ATATAGATGA AGGACTGGCA GAAACCATCC GCTATTTTGA CGCCCTGCTC ACGGCGCGCA AAGCCGAGGG AGCAGATATA CGCTGA
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Protein sequence | MQQGEFKNLA RKRILVTGGA GFIGSHLCRV LLDRGAEVLC ADNYFTGSRD HVRDLLDNPR FELLRHDITF PLYIEVDEIY NLACPASPVH YQFDPVQTTK TCVHGSINML GLAKRVKARI LQASTSEVYG DPEIHPQQED YWGRVNPIGP RSCYDEGKRC AETLFMDYRR QHGVEIKIAR IFNTYGPNMH PNDGRVVSNF ILQALQHKPI TIYGDGSQTR SFCYVDDLVS GLLRLMHSPA DFCGPVNLGN PSERTVLELA DKIITLTGSR SELVFKPLPA DDPQRRRPDI SMARRHLEWE PAVDIDEGLA ETIRYFDALL TARKAEGADI R
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