Gene Dde_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3060 
Symbol 
ID3758054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3051577 
End bp3052572 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content58% 
IMG OID637783970 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_389549 
Protein GI78358100 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0392933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGG GAGAATTCAA AAATCTTGCC CGCAAGCGCA TTCTGGTAAC CGGCGGGGCG 
GGCTTCATCG GTTCGCACCT GTGCCGGGTG CTGCTCGACA GAGGTGCAGA GGTGCTGTGT
GCGGACAACT ATTTCACCGG CAGCCGCGAC CATGTGCGCG ACCTGCTGGA TAACCCGCGC
TTTGAGCTGC TGCGTCACGA CATCACCTTT CCGCTCTACA TAGAGGTGGA CGAAATATAC
AATCTGGCCT GTCCGGCATC ACCGGTGCAT TACCAGTTTG ACCCCGTGCA GACCACAAAG
ACATGCGTAC ACGGCAGCAT CAATATGCTG GGTCTTGCCA AACGGGTCAA AGCACGCATT
CTGCAGGCAT CCACCAGCGA AGTGTACGGC GACCCGGAAA TACACCCCCA GCAGGAAGAC
TACTGGGGGC GCGTGAACCC CATCGGGCCA CGGTCGTGCT ACGACGAAGG CAAGCGCTGC
GCAGAAACGC TTTTTATGGA CTACCGGCGG CAACACGGTG TGGAAATCAA AATAGCCCGT
ATTTTCAACA CCTACGGCCC CAACATGCAC CCGAATGACG GCAGGGTTGT GTCAAATTTC
ATCCTGCAGG CACTGCAGCA CAAACCCATT ACCATTTACG GCGACGGCTC GCAGACGCGG
TCATTCTGCT ATGTGGACGA TCTGGTGTCG GGCCTGCTGC GGCTGATGCA CAGCCCGGCC
GATTTCTGCG GGCCGGTCAA TCTGGGCAAT CCCTCCGAAC GTACGGTGCT TGAACTTGCC
GACAAAATCA TCACCCTCAC CGGCTCGCGT TCCGAACTTG TATTCAAACC GCTGCCCGCA
GACGACCCGC AGCGCCGCAG ACCGGACATA AGCATGGCCC GCCGTCATCT GGAATGGGAA
CCCGCCGTGG ATATAGATGA AGGACTGGCA GAAACCATCC GCTATTTTGA CGCCCTGCTC
ACGGCGCGCA AAGCCGAGGG AGCAGATATA CGCTGA
 
Protein sequence
MQQGEFKNLA RKRILVTGGA GFIGSHLCRV LLDRGAEVLC ADNYFTGSRD HVRDLLDNPR 
FELLRHDITF PLYIEVDEIY NLACPASPVH YQFDPVQTTK TCVHGSINML GLAKRVKARI
LQASTSEVYG DPEIHPQQED YWGRVNPIGP RSCYDEGKRC AETLFMDYRR QHGVEIKIAR
IFNTYGPNMH PNDGRVVSNF ILQALQHKPI TIYGDGSQTR SFCYVDDLVS GLLRLMHSPA
DFCGPVNLGN PSERTVLELA DKIITLTGSR SELVFKPLPA DDPQRRRPDI SMARRHLEWE
PAVDIDEGLA ETIRYFDALL TARKAEGADI R