| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3059 |
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| Symbol | |
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| ID | 3758053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3050093 |
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| End bp | 3051544 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637783969 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_389548 |
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| Protein GI | 78358099 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00615002 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCAGC TTTTCCGCTC TCTGCCCTCT GTTGATGCCG TGCTGCACGC GCTGGCGGCC
CGGCCGCAGG AAGCCGCTTC CGGTTCCCGC AGCCGGAAAG ATACCCCACC CACCGGCAAT
GACGCAGCCA GCATGCCGCG CGCCATGCTG CGCGAGCATA TCAACGCATT TCTGGATATC
TGCCGCGAAG AAATCCGCGC CGGAGTGCAC TCCAGTCCCG AAGCGCTTTC GCTGGATGCG
CTGCTGCCGC GCCTGACCGC ATATGTCGCA GCCAAAAGCA GGCCGCGTTT CAGGCGGGTT
CTCAACGGCA CGGGCGTGGT GGTGCACACC AATCTGGGCC GTTCGCTGCT GGCGGCAGAA
GCCACACGCG CCGTCAGTCA GGCATGCGCC CACTACTCCA ACCTTGAGTT CGACCTTGCC
ACCGGTGAAC GCGGCAGCCG CTACAGCCAT GTGGAAGAAA TACTGAAAAG CGTGACAGGC
GCAGAAGCCG GTCTGGTGGT CAACAACAAT GCCGCCGCCG TACTGCTGGT GCTGGACACT
CTGTGCAAAG GCAGAGAGGT CATCGTCTCA CGCGGGCAGC TGGTAGAAAT AGGCGGCAGT
TTCCGCATTC CCGATGTGAT GACCCGCAGC GGTGCCATAC TGCGCGAGGT GGGCGCCACC
AACCGCACGC ATCTCAAAGA CTATGCCGGG GCCATCAACG AAAACACGGC GGCGCTGCTC
AAGGTGCATA CCTCCAATTA CCGCATCACG GGATTCCACA AAGAGGTGCC GCTGGAAGAA
CTGTGCAGTC TGGGCAGACA GCACCGGCTT CCGGTCATTG AAGATCTGGG CAGCGGTGTG
TTTTATGATT TTTCCGGCCT GGGCATGGGG CACGAACCCA CAGTGCAACA GGTGGTGGCT
GACGGTGCCG ACGTGGTCAC TTTTTCGGGA GACAAAGTGC TGGGCGGCCC GCAGGCAGGC
ATTATAGTGG GGCGGCGTGA AATAATAGAA CGCATCAAGA AAAACCCCAT GAACCGCGCC
CTGCGCATTG ATAAAATGAC ACTCGCCGCG CTGGAAGCCA CTTTGCGGCT GTATACAGAC
ATGGACCGCG CCAGACGCGA AATTCCCACG CTTGCCATGA TTCTGGCCAC CCCGGACGAA
CTGGCCCGCC GCGCACGACG GCTTGCCGCC CGCCTGCGCA GAACACTGGA AGACCGCGCC
ACGGTAACCC TGCGCAAGGG CGCTTCACGC GTGGGCGGGG GCTCTTTTCC CGAACGCGAC
CTGCCCACCA CACTGGCCTG CGTGCATCCG GCATCCGTTT CCGCCACCGA ACTGAAAAAC
CGCCTGCTGG ACACCGACCC GCCGCTGGCC GGCATGCTGC TGGAAGACGC TTTCTGCCTT
GACCCCAGAA CCCTGACCGA CGAAGAATTC AAACTGGCAG CGGGCGCGCT GGCACAGGCC
CTGAACGTCT GA
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| Protein sequence | MNQLFRSLPS VDAVLHALAA RPQEAASGSR SRKDTPPTGN DAASMPRAML REHINAFLDI
CREEIRAGVH SSPEALSLDA LLPRLTAYVA AKSRPRFRRV LNGTGVVVHT NLGRSLLAAE
ATRAVSQACA HYSNLEFDLA TGERGSRYSH VEEILKSVTG AEAGLVVNNN AAAVLLVLDT
LCKGREVIVS RGQLVEIGGS FRIPDVMTRS GAILREVGAT NRTHLKDYAG AINENTAALL
KVHTSNYRIT GFHKEVPLEE LCSLGRQHRL PVIEDLGSGV FYDFSGLGMG HEPTVQQVVA
DGADVVTFSG DKVLGGPQAG IIVGRREIIE RIKKNPMNRA LRIDKMTLAA LEATLRLYTD
MDRARREIPT LAMILATPDE LARRARRLAA RLRRTLEDRA TVTLRKGASR VGGGSFPERD
LPTTLACVHP ASVSATELKN RLLDTDPPLA GMLLEDAFCL DPRTLTDEEF KLAAGALAQA
LNV
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