Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3048 |
Symbol | |
ID | 3758041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3038829 |
End bp | 3040025 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637783957 |
Product | diguanylate cyclase |
Protein accession | YP_389537 |
Protein GI | 78358088 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.795755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCGTCA CCGGAAATTC AGTACTTTTT GCCAGAGAAT ATGAGCTGAT AGCCGAAGCG GAAGCTGCAT TGGCCCGTAT GGCACCGGAG GCTCCGGCGC ATGATGCGCT GGCAGGTCTG CTTGCGGGGT TCTGCAAAAC GCTGCGGCAA TGCGGCCGGC TTATGTCCAT GGGGGACAGA ATGCAGGCGC AGCTGAGTGA ACTGAACCGC GATATCGCGG CCAAAGAAGC GCGCTACCGC TCCATTTTTC AGTGCGCGGC CGAAGGGGTT TTCCGTACCG GTGCAGACGG CAGCTTTGCG GAAGTCAATC CTGCCATGGC AAACATTTTC GGCTGGTCTT CGGTGGATGC GTTCATGCAG CACAACACCA GCCTTGCTTC TTTGTTTTCA TCGCCGCAGG CGCACTGCGA ATATCTGGAC AGGCTGTGCA GCGCCGGAGC TGTTTCACGT TACGAAGCTG TTCTGCGACG CAGAGACGGC ACGCCCGTAT GGGTCGAAAT CAGCACGCAG GCGCTGGAAA CAGCTCCGGA GACGGCCTGC GGCGCCACGC ATGTGGGCGT GGTGCTTGAT GTGACCGCCC ACAGGCGCAT GCTTGAAGAG CTGTCACACA TGGCCCGTAC CGATCCGCTG ACCGGTCTTA ACAACCGCCG TTTTTTTATG GAGGCAGCCC GTGCCGAAGT GGAGCGCATG CAAAGCAGCG GCAGGCCGCT CTCTTTGCTG ATGCTCGACA TAGACCACTT TAAACGGGTC AACGACACGT GGGGGCACGA TGCCGGTGAC ATGGTGCTCA AACAGCTTTC CTGCTGCCTT GCAGAGACCA TGCGCGGACA GGATGTCTGC GCGCGGCTGG GCGGAGAAGA GTTTGCCGTG CTGCTGCCGG AAACAGGCCA CGCCGAGGCC TGCCGTGCCG CGGAAACACT GCGTCAGGCT GTGGCCGGCA TGGCGTTTGC CGGGCATGGT TTTTCCGTCA CGTCGTCGCT GGGCCTTACC ACACTGGATT CCGCGGGGCA TGCCGTTTCG GGGCAGCGTC CTGTGCCGGG GGGCGTTGCG GTCTCTGCCT GCTGCGGGCA GGTGGTGGAA ATCCTGCTGA AGCGGGCCGA CATTGCCCTG TATGCGGCAA AAAAGAACGG CCGCAACCGT ACGGAAGTAT ATCCTGCCCG TTGCACTGCC ATATGCGCCG GGGCGTTATG CATCTGA
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Protein sequence | MSVTGNSVLF AREYELIAEA EAALARMAPE APAHDALAGL LAGFCKTLRQ CGRLMSMGDR MQAQLSELNR DIAAKEARYR SIFQCAAEGV FRTGADGSFA EVNPAMANIF GWSSVDAFMQ HNTSLASLFS SPQAHCEYLD RLCSAGAVSR YEAVLRRRDG TPVWVEISTQ ALETAPETAC GATHVGVVLD VTAHRRMLEE LSHMARTDPL TGLNNRRFFM EAARAEVERM QSSGRPLSLL MLDIDHFKRV NDTWGHDAGD MVLKQLSCCL AETMRGQDVC ARLGGEEFAV LLPETGHAEA CRAAETLRQA VAGMAFAGHG FSVTSSLGLT TLDSAGHAVS GQRPVPGGVA VSACCGQVVE ILLKRADIAL YAAKKNGRNR TEVYPARCTA ICAGALCI
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