| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3022 |
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| Symbol | |
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| ID | 3758012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3008730 |
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| End bp | 3010430 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637783928 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_389511 |
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| Protein GI | 78358062 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAACAG CCGGTGAACT CTGTATAGTG CGGCAAAACA GGATAGCTGC CACCCCGCTC
ATGAACTCAT TACAACACTT TCTTCTTACC CCGTTCTCGG CATCTGTAGG CTGCGGCCTG
CTGCTGCTCA CATTCAGTGC ACTGCGGTAC CTCAAACTGC TCAGGGAAGT CCGGCGGCAT
CCGGTGTCAC TGCACCGCTG CGGAACCACA CAGTTTATCA CGCTGGTGGG CTTCATCGCC
ATGTTCATGG TGCTGTATCT GCTGATGCTT ACAAACAGCG GCCCGCATAT TCCGCAGGAC
ATCTCCGCCA TATCCGGAAC CATACTTTTT CTCGGAGCCG TCTTTGTATT CATTACGGCA
CAGGTGACTT CCACAGGGCT GCATACCGCC CTTTCCGCCA ATGCCTCGCT GCAGCATCAG
GCCGTGCACG ACTACCTGAC GGGGCTGCCC AACCGCCGGC TCATCATGGA ACTGCTCGGC
GAAGCCATGC AGACCGCTCC TGCCGGATAT GCACTGGTTT TTGTGGATAT CATGAACTTT
AAACGGGTTA ACATCAGCTT TGCTCATTAT GTGGGCGATC AGATTCTGGA GCAGGTCGGG
CAGCGTCTCC AGACGTCCAT GAAACCCGGC GATGTGGCAG CCCGTCTCGG CGGTGACGAC
TTTGCCATCC TGCTGCGCAC AGGCAGCCCG CGCGAAGCTG TTCAGCGCAC ACAGGCGGTC
AAGGCGGCGC TGAAACAACC GTATTTTTCC GGCGATATCC AGTTTTCGCT GGATTGCGGT
TTCGGCCTGT ATATGGGAAC CGCGCAGGAT ACCAGACCCG AACATGTGAT TGCCAAAGCC
AACACGGCCA TGATGCGGGC CAAGCAACGC GGCAGAAACC GCATTGCCGT ATTCAGCCGC
TCCATGCAGG ACAAAGCCCA GCTCACCATC CATTTTGAAA ACCAGTTCCG CCGCAGTCTG
CGCAACGGAG ACTTCTTTCT TGTCTTTCAG CCGCAGTACG CCCTTACCCC TCAGCCGGAA
CTGATAGGCT TTGAAACGCT TGTCCGCTGG AACCACCCCG AAAGGGGAAT AGTGAGTCCT
GCCGAATTTG TGCCCATGGC GGAAACCACC GGGCTTATTC TGCACCTTGA CCGCTATGTG
CTGCGCGAAG CCTGCCGCAT ATGGGGAGAA ATGCGCGCCA GTCTTCCCGC GTGCCGCGCG
CTGCATTTTT CCGTCAACCT GAGCGCCTCG CACATGGACC GCCCGACCTT TATCCGCAAG
CTGGAAAAAA CACTGGCGGC CTTTGAGATG CCGCACGAAT CCATCATTCT GGAACTGACT
GAATCCGCCC TGATGAGCAA TCCGGAAACC GCCGCCCGCA AAATGCAATA TCTGCGCAGC
ATCGGCCTGC ATGTGGCGCT GGACGATTTC GGCACAGGAT ATTCTTCGCT GGCTTATCTG
ACACGTTTTC CCTGCTACTG CCTGAAAATT GATAAAAGCT TTGTGGACAA CATAACCACC
GATGAAAACT CCGTGCGTGT GGTGCGGGCC ATCATCCATC TGGCACACGG TCTGGGTATG
GTGGCTCTGG CCGAAGGCGT GGAAACACCT GAACAGCTGG CGCAACTGCA GGATATGGGC
TGTGATCAGG TTCAGGGCTA TCTGCTGGGC AAGCCTATGC CGCAGGCGGC CCTGCGGGAT
GTCATAGCCC GCAACTGCTG A
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| Protein sequence | MTTAGELCIV RQNRIAATPL MNSLQHFLLT PFSASVGCGL LLLTFSALRY LKLLREVRRH
PVSLHRCGTT QFITLVGFIA MFMVLYLLML TNSGPHIPQD ISAISGTILF LGAVFVFITA
QVTSTGLHTA LSANASLQHQ AVHDYLTGLP NRRLIMELLG EAMQTAPAGY ALVFVDIMNF
KRVNISFAHY VGDQILEQVG QRLQTSMKPG DVAARLGGDD FAILLRTGSP REAVQRTQAV
KAALKQPYFS GDIQFSLDCG FGLYMGTAQD TRPEHVIAKA NTAMMRAKQR GRNRIAVFSR
SMQDKAQLTI HFENQFRRSL RNGDFFLVFQ PQYALTPQPE LIGFETLVRW NHPERGIVSP
AEFVPMAETT GLILHLDRYV LREACRIWGE MRASLPACRA LHFSVNLSAS HMDRPTFIRK
LEKTLAAFEM PHESIILELT ESALMSNPET AARKMQYLRS IGLHVALDDF GTGYSSLAYL
TRFPCYCLKI DKSFVDNITT DENSVRVVRA IIHLAHGLGM VALAEGVETP EQLAQLQDMG
CDQVQGYLLG KPMPQAALRD VIARNC
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