Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3021 |
Symbol | |
ID | 3758011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3007854 |
End bp | 3008642 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637783927 |
Product | nitroreductase family protein |
Protein accession | YP_389510 |
Protein GI | 78358061 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACAA TAACGATTGA TCAGGAAAAA TGCAGCGCGG ACGGCCTGTG TATGGCCGAA TGTCCCTTTC TGCTGCTTAC CCCGCGTGAA GACGGCGTGC CCCAGCTGGT AAAAGGCGCG GAAAACATGT GTGTGAACTG CGGGCACTGC ATGGCTGTCT GTCCGGCCGG CGCCATAAGC GTAGGCGGTG CCGACAGTGC TGACTTTCCC CGTACGGATG CCGGACTGGC CGTGACCATC CCGCAGGCCA TGCAGCTTTT CCGCGGACGC AGATCTGTAC GGGTCTTCAG AAAAGACCCT GTTTCGCGCG CGGACATAGA AACGCTTATC GACATGACCC GCTGGGCACC CACTGCGCGC AATCTGCAGC CTGTGCACTG GATGGTGGCG GAACAGCCGC ATGTAAACCG GCTGGCGGAA CTGGTCATTG AGTGGATGCG CCGCAACGGT ACACTGCCCG AAATTGTGGA AGCATTTGAA AACGGCCGCG ACATGATACA CCGCAACGCC CCGTGTCTGC TCATTGCTCA TGCGCATGAA GCGTCGCTTT CTCCGCAGGT CGACTGCGCC ATTGCTCTGG CATCGGTGGA AGTTGCCTGC CAGCCCATGG GACTTGGCGC ATGCTGGGCA GGGTTTTTCA TGCGCGCGGC AAAATTCTAT CAGCCCATTA ATGAATACCT GAAGCTGCCG GAAGGCCACC ATGTATACGG CGCCCTTATG CTGGGCACGC CCGCTCACAG GCTGCGGCGT ATTCCGCCCA GAGCCGCGGC TTCCGTCACG TGGCGCTGA
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Protein sequence | MPTITIDQEK CSADGLCMAE CPFLLLTPRE DGVPQLVKGA ENMCVNCGHC MAVCPAGAIS VGGADSADFP RTDAGLAVTI PQAMQLFRGR RSVRVFRKDP VSRADIETLI DMTRWAPTAR NLQPVHWMVA EQPHVNRLAE LVIEWMRRNG TLPEIVEAFE NGRDMIHRNA PCLLIAHAHE ASLSPQVDCA IALASVEVAC QPMGLGACWA GFFMRAAKFY QPINEYLKLP EGHHVYGALM LGTPAHRLRR IPPRAAASVT WR
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