| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3016 |
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| Symbol | |
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| ID | 3758006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 3000757 |
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| End bp | 3002814 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637783922 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_389505 |
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| Protein GI | 78358056 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAATC ACATTCTGAA ACGCGACGGC AGACTGGAAA CCTGGTCCAC AGACCGCATC
GCAGGCGCCA TCTTTAAATC TCTCAAAGCC AGCGGCATCA AAGATCCCCT GCTTTCCAAG
CGCCTTGCCC GCAAGGTTGA GGAAAAACTG AACGACGAAG ACACGCCCGA ACAGGAACGC
GTGCAGGACA TGGTACAGCA GGTGCTGATG GAAGCACGCC TGTACAATGT TGCAGAGCGT
TACATTATCT ACCGCGAAAA ACGCCGCGAG ATGCGTTCGC AGGGGCAGGC GTATCTTGAT
ATTTCGCAGA TGATCGAAAG CTATCTTGAC CGCAGCGACT GGCGCGTGAA TGAAAACTCC
AACATGGGGC ATTCGTTTCA GGGACTGATT CTGCACATGG CAGGTTCGGT ACAGGCCCGC
TATGTGCTGG AAAAATACCC CGAAGAAATC CGGCAGGCGC ATCAGCACGG TTATTTCCAT
ATCCATGACC TGTCGTTCGG TCTTGCCGGG TATTGCGCCG GCTGGAGCCT GCGCGACCTG
CTGCTTGAAG GATTCAATCT GGCTGGGCGC TGCTCTTCCG CACCTGCCCA GCATTTTGAT
GCGGCATGCG GACAGATTGT CAACTTTCTG GGCACGCTGC AGAACGAGTG GGCCGGTGCT
CAGGCGTTCA ACAACGTGGA TACCTACCTT GCCCCGTTTG TGCGCAAGGA CGGCCTGACC
TACAAGCAGG TCAAGCAGCG CATGCAGAAC CTTGTGTACA ACCTGAACAC CACCTCGCGC
TGGGGCGGGC AAAGCCCGTT CACCAACTTC ACGTTTGACG TGGTGCCCCC GTCGCATATC
GCCAACGAAC CTGTGATCAT CGGCGGCGCT TTCCAGGATT CCACCTACGG CGAATACGCC
GAGGAAATGG ACATGATCAA CCGCGCCTTC ATCGAGGTTA TGCTGGAAGG CGATGCGGAC
GGACGGATAT TCTCCTTCCC CATTCCCACG TACAACGTGA CCAAGGATTT TCCGTGGGAA
TCCGAAACCG GTCAGCTGCT TTTGCAGCTC ACCGCCAAAT ACGGCGTGCC GTATTTCCAG
AACTTCATCA ATTCGGACCT CAACCCCGAA GATGTGCGCT CCATGTGCTG CCGACTGCAG
ATGGACCTGC GCGAAATACG CAAAAAAACC GGCGGTCTGT TCGGTTCCGG CGACCTTACC
GGCTCCATCG GCGTGGTTAC GCTGAACCTG CCCAAGCTGG CGTATCTTGC TCACAATGAA
GATGATTTCC TTGATCTGGT GACAGAATAT GCCGAAATGG CCCGCGACTC GCTGGAATAC
AAGCGTAAAA TGTGCCAGCA GAACCTTGAT AACGGCATGT TCCCGTTTTC GCGCCGGTAT
CTGAAAAACG GCTATGCCGG GCATTTTTCA ACCATCGGCC TCATCGGCGG ACACGAAGCA
TGCCTGAACC TGCTGGGCAA AGGCATTGAA AGTGAAGGCG GGCTGCGTCT GATGACCCGC
GTGCTTGACC GCCTGCGCGA ACTGGTGCTG CGTTTTCAGG AAGAGACAGG CCATCTGTAC
AATCTTGAAG CCACTCCGGG TGAAGGTACC TGCTACCGTC TGGCAAAAAT CGACAAGGAA
CTGTACGAAG ATATCCGTAC TTCCGGTGAA AGCGTACCGT ACTACACCAA CTCCACGCTG
CTGCCCGTGG GTATTTCCAC CGACGTTTTC TACGCGCTGG ACCACCAGAA CGAGTTGCAG
ACCCTGTACA ACGGCGGTAC GGTATTCCAC ACCTTCCTCG GCGAGGCCGT GACCGAGCCG
GAGTCGGTGA AAAACTTCCT TGTAAAGGCC ATGACCAACA CCAAACTTCC GTACATCTCG
CTCACTCCGA CGTTTTCGGT GTGCAAGGAC CACGGCTACC TGAACGGTGA ACACTTCAAC
TGCCCCACCT GCGGGCAGGA TGCAGAAGTG TACACCCGTG TTGTGGGCTA CTACCGCCCC
GTCAGCCGCT GGAACAAGGG CAAGCAGGAA GAATACAGAG AACGTGCCGA ATACATGATG
CCGTGCTGCG GCAACTAG
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| Protein sequence | MPNHILKRDG RLETWSTDRI AGAIFKSLKA SGIKDPLLSK RLARKVEEKL NDEDTPEQER
VQDMVQQVLM EARLYNVAER YIIYREKRRE MRSQGQAYLD ISQMIESYLD RSDWRVNENS
NMGHSFQGLI LHMAGSVQAR YVLEKYPEEI RQAHQHGYFH IHDLSFGLAG YCAGWSLRDL
LLEGFNLAGR CSSAPAQHFD AACGQIVNFL GTLQNEWAGA QAFNNVDTYL APFVRKDGLT
YKQVKQRMQN LVYNLNTTSR WGGQSPFTNF TFDVVPPSHI ANEPVIIGGA FQDSTYGEYA
EEMDMINRAF IEVMLEGDAD GRIFSFPIPT YNVTKDFPWE SETGQLLLQL TAKYGVPYFQ
NFINSDLNPE DVRSMCCRLQ MDLREIRKKT GGLFGSGDLT GSIGVVTLNL PKLAYLAHNE
DDFLDLVTEY AEMARDSLEY KRKMCQQNLD NGMFPFSRRY LKNGYAGHFS TIGLIGGHEA
CLNLLGKGIE SEGGLRLMTR VLDRLRELVL RFQEETGHLY NLEATPGEGT CYRLAKIDKE
LYEDIRTSGE SVPYYTNSTL LPVGISTDVF YALDHQNELQ TLYNGGTVFH TFLGEAVTEP
ESVKNFLVKA MTNTKLPYIS LTPTFSVCKD HGYLNGEHFN CPTCGQDAEV YTRVVGYYRP
VSRWNKGKQE EYRERAEYMM PCCGN
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