Gene Dde_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3012 
Symbol 
ID3758810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2997521 
End bp2998081 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content55% 
IMG OID637783918 
Productorotate phosphoribosyltransferase 
Protein accessionYP_389501 
Protein GI78358052 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.678971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATC TCAAACGCCG TCTTGCAAAA ATACTTGCAG AAAAATCATA TAAAGAAGGC 
GACTTTACAC TCGCCTCCGG CAAGAAAAGC GATTATTATT TCGACTGCCG TCAGACCGCC 
CTGCATGCGG AAGGTTCGTG GCTTATCGGC AACCTGTTCT TTGAAATGAT ACAGAACATG 
GACGGTGCCG GTGTGGGCGG CATGACGCTG GGCGCAGACC CGCTGGTCAC TGCCGTCACG 
GTGATATCGC ACGAAAAAGG CCGCCCCCTG CCGGGCCTTA TTGTACGTAA ACAAGCCAAA 
GGGCACGGCA CAGGACAGTA CGTGGAAGGA CTGGCCAACT TCAGTCAGGG CGACACCGTC 
ATCATGCTTG AAGACGTGGT CACCACCGGC GGTTCGGTGC TTACAGCCAT CGAACGCATT 
GAAGCCGCAG GGCTGAAAGT AGCCGCAGTG TGCTGCGTGC TGGACAGAGA AGAAGGCGGC 
CGCCAGGCAC TGGAAGAAAA GGGCTATGCC CTGCATTCCA TTTTTACCCG CAAGCAGCTT 
GTGGAAGCTG CACGCTCATA A
 
Protein sequence
MNDLKRRLAK ILAEKSYKEG DFTLASGKKS DYYFDCRQTA LHAEGSWLIG NLFFEMIQNM 
DGAGVGGMTL GADPLVTAVT VISHEKGRPL PGLIVRKQAK GHGTGQYVEG LANFSQGDTV 
IMLEDVVTTG GSVLTAIERI EAAGLKVAAV CCVLDREEGG RQALEEKGYA LHSIFTRKQL 
VEAARS