| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2989 |
|---|
| Symbol | |
|---|
| ID | 3757998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2969589 |
|---|
| End bp | 2970782 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637783894 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_389478 |
|---|
| Protein GI | 78358029 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGG AAAAATTTGA ACGTACTAAG CCGCATGTTA ACATCGGCAC CATCGGTCAC
ATCGACCACG GCAAAACCAC TCTGACCGCA GCAATCACCA AGATTGCCAG CCTCAAGATG
GGTTCCAAAG CAGTTGCCTA CGACGAAATC GACAAGGCTC CTGAAGAAAA GGAACGCGGT
ATCACCATTG CTACCGCTCA CGTGGAATAC GAGACCACTC TGCGTCACTA TGCCCACGTG
GACTGCCCCG GTCACGCTGA CTACATCAAG AACATGATCA CCGGTGCTGC TCAGATGGAC
GGCGCAATCA TCGTTGTTGC CGCCACCGAC GGTCCCATGC CCCAGACCCG TGAGCACATC
CTGCTTGCCC GTCAGGTCGG CGTGCCCAGC ATCGTCGTGT TCCTGAACAA GTGCGACATG
GTTGACGACG AAGAACTGCT CGAACTGGTT GAGCTTGAAG TTCGCGAACT GCTGTCCAGC
TACGACTTCC CCGGCGACGA CACCCCGGTT ATCCGTGGTT CCGCCCTGAA GGCTCTGGAA
TGCGACAGCG CAGACGATGA CGCTGCAAAG CCCATCCTTG AGCTGCTGGA TGCATGCGAC
AGCTACATCC CCGAGCCCGA GCGCGACACC GACAAGCCCT TCCTGATGCC CATCGAAGAC
GTGTTCTCGA TCTCCGGCCG CGGTACCGTT GTTACCGGCC GTGTTGAGCG TGGCATTATC
AAGGTCGGCG AGCAGATCGA AATCGTTGGT ATCAAAGATA CCATGACCAC CACCTGCACC
GGTGTTGAAA TGTTCCGCAA GCTGCTTGAC CAGGGTCAGG CCGGCGACAA CGTGGGCGTG
CTGCTGCGCG GTGTGAAGCG TGATGATGTT GAGCGTGGTC AGGTTCTGGC TGCTCCCAAA
AGCATCACTC CTCACAAGAA GTTCAAGGCA GAAGTGTACG TGCTCTCCAA GGAAGAAGGC
GGCCGTCATA CTCCGTTCTT CTCCGGCTAC CGTCCCCAGT TCTACTTCCG TACCACTGAT
ATCACCGGTA TCATCGGTCT GGAAGAAGGC GTGGAAATGG TTATGCCCGG TGACAACGCC
ACCTTCATCG TGGAACTCAT TCACCCCGTC GCCATGGAAC AGGGCCTGCG CTTCGCTATC
CGCGAAGGTG GCCGTACCGT AGGCGCAGGT GTTGTTTCCG AGATTCTGGA GTAA
|
|---|
| Protein sequence | MGKEKFERTK PHVNIGTIGH IDHGKTTLTA AITKIASLKM GSKAVAYDEI DKAPEEKERG
ITIATAHVEY ETTLRHYAHV DCPGHADYIK NMITGAAQMD GAIIVVAATD GPMPQTREHI
LLARQVGVPS IVVFLNKCDM VDDEELLELV ELEVRELLSS YDFPGDDTPV IRGSALKALE
CDSADDDAAK PILELLDACD SYIPEPERDT DKPFLMPIED VFSISGRGTV VTGRVERGII
KVGEQIEIVG IKDTMTTTCT GVEMFRKLLD QGQAGDNVGV LLRGVKRDDV ERGQVLAAPK
SITPHKKFKA EVYVLSKEEG GRHTPFFSGY RPQFYFRTTD ITGIIGLEEG VEMVMPGDNA
TFIVELIHPV AMEQGLRFAI REGGRTVGAG VVSEILE
|
|---|
| |