Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2986 |
Symbol | lpxC |
ID | 3757991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2966706 |
End bp | 2967623 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637783887 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_389475 |
Protein GI | 78358026 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGA CCACCATCAA AAAAACCATC GGATGCTCGG GCATCGGACT GCACAGCGGC AAAGTGGTCA GACTGACACT GCGCCCCGCC CCCGAAGACA CCGGCATCGT ATTTCATATC CGCACAGAAG ACGGCGTACA CCGCCTTACC CCCAGACCTG ACGATGTCAT CGCCACCGGT CTTGCCACCA CACTGGGCCT CAACGGCTCG TCCGTAGCCA CGGTGGAACA TCTGCTGGCC GCCATACGCG GCATGCAGAT TGACAACATC CAGATAGACA TCGAAGGCAA CGAAATCCCC ATCATGGACG GCAGCGCCGC ATCTTTCGTT TTTCTGCTGA AGGATGCAGG CATCGCGCGG CAGAACAAGC CGCGACAGGT CTACCGCATC AAAAAGCCGG TGACCTACGA ACGTGACGGC AAGTGGATAA AAGCCGCACC GCATGACGGA CTGCGCATCG AATACACCAT AGAATTCGAC CACCCGGCCA TCGGCAGACA GTCCATGGAC ATCGAAGTCA CCCCCGAAGC ATTCGCGGGC ATCATCGCCA AAGCACGCAC ATTCGGCTTT CTGCGCGAAG TGGAGTACCT GCACAGCAAC GGTCTGGCGC TGGGCGGCTC TCTGGACAAC GCCATAGTTC TGGATGAATA CAATGTGCTC AACGAAGACG GCCTCCGGTT CGATGACGAG TTCGTGCGCC ATAAAATTCT CGACTTCATC GGAGACATGG CACTGCTGGG CGCCCCGCTG CAGGGGCATT TTCAGGTTCA TTGCTCCGGC CATGCCCTTA ATAACGGCTT TTTGCGCACC ATAAGCGAGC ACGAAGAACT CTACTTGAAA AGAGTGGAGC TCTCGGAAAC GGCACAGCGC GAGCACGCCG TTGAAGCAGC ACCAGCAGGA ACGCCTGTAG CTGCTTAG
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Protein sequence | MNQTTIKKTI GCSGIGLHSG KVVRLTLRPA PEDTGIVFHI RTEDGVHRLT PRPDDVIATG LATTLGLNGS SVATVEHLLA AIRGMQIDNI QIDIEGNEIP IMDGSAASFV FLLKDAGIAR QNKPRQVYRI KKPVTYERDG KWIKAAPHDG LRIEYTIEFD HPAIGRQSMD IEVTPEAFAG IIAKARTFGF LREVEYLHSN GLALGGSLDN AIVLDEYNVL NEDGLRFDDE FVRHKILDFI GDMALLGAPL QGHFQVHCSG HALNNGFLRT ISEHEELYLK RVELSETAQR EHAVEAAPAG TPVAA
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