Gene Dde_2981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2981 
Symbol 
ID3757986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2962277 
End bp2963026 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content62% 
IMG OID637783882 
Producthemolysin A 
Protein accessionYP_389470 
Protein GI78358021 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGTA AGGAACGCGC AGATCAACTG GTTTATGAAC AGGGACTGGC CGAAAGCCGC 
GAACAGGCCA AACGGCTTAT CATGGCGGGC AAGGTGTATG TGCTGCGCCC CGGGGCAGAG
CCTGAACCGG TGGGCAAGCC GGGCACGCGC TATGACGCCT GCTGGCATAT GGAGCTGAAA
GGCGTGGAGC GGTTTGTCAG CCGCGGCGCG TACAAGCTGC TTACCGCCAT AGAGACATTC
GGACTGGATG TGCAGGGTAT GGTGGCGCTG GATGCGGGTG CTTCCACCGG CGGCTTCACC
GACTGTCTGC TGCAGCACGG GGCGGCGCGG GTGTATGCCG TTGATGTGGG TAAAAACCAG
CTGCACGAGC GCATGCGCTC CGACAGCCGC GTGGTAAGCA TGGAAGGGGT CAACCTGCGG
ACCGCGCCGG ACGATCTGCT GCCGGAACAG GTAGATATTA TCGTGGCGGA TGTTTCGTTC
ATTTCGCTTA CGCTCATTCT GCCCGCCTGC CTGCGTTTTC TGCGCAAGGG AGGAGTGGTG
GCTGCGCTTG TCAAGCCGCA GTTCGAGGTG GGAGCCGGTC AGACCGTCAA AGGCGTTGTG
CGCGATGAGG CACTGCGCAG GCAGGCGGTG GACAAAGTGC TCGACTTTGC CCGCGACCAG
CTGGGGCTGA CCGTGCAGGG GGTGGTGCCT TCGGCCATCA AAGGGCCGAA GGGCAATCAG
GAATACATCG CCTGTCTGCG GCTGCCATGA
 
Protein sequence
MPRKERADQL VYEQGLAESR EQAKRLIMAG KVYVLRPGAE PEPVGKPGTR YDACWHMELK 
GVERFVSRGA YKLLTAIETF GLDVQGMVAL DAGASTGGFT DCLLQHGAAR VYAVDVGKNQ
LHERMRSDSR VVSMEGVNLR TAPDDLLPEQ VDIIVADVSF ISLTLILPAC LRFLRKGGVV
AALVKPQFEV GAGQTVKGVV RDEALRRQAV DKVLDFARDQ LGLTVQGVVP SAIKGPKGNQ
EYIACLRLP