Gene Dde_2959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2959 
Symbol 
ID3757964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2938958 
End bp2939983 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content59% 
IMG OID637783860 
ProductFis family transcriptional regulator 
Protein accessionYP_389448 
Protein GI78357999 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTAA AGACAGCCGG CATTATCGGG CAAAGCTCTT CGCTCAGAGA TCTTTTTCGC 
GTACTCGCCA AAGTGGCACC CACCGACAGC ACAGTACTGG TCACCGGAGA ATCCGGTACC
GGTAAAGAGC TGCTTGTCCG TGCGCTGCAT ATGAACAGCC AGCGCGCGGA CAAACCTTTT
GTGCCCATAA ACTGCGGCGC CATTCCGCGC GAGCTGCTCG AATCTGAACT CTTCGGACAC
GAAAAGGGAG CCTTCACCCA CGCCATCCGC ACGCGTCCCG GCCGCTTTGA AGTGGCGGAC
GGCGGCACTA TTTTTCTGGA CGAAATAGGC GAGATGGACC TGACGCTGCA GGTCAAGATA
CTTCGCGTAT TGCAGGAAAA AGAAATCGAG CGCGTCGGCG CCACAGCCAC CCGCAAAGTC
GATGTACGCA TAGTGGCGGC CACCAACCGC GATCTGGAAA CAGAAGTCCG CGAAGGCCGG
TTCCGCGAAG ACCTGTACTA CCGCCTCAAC GTCATTCCGC TGCACCTGCC TCCGCTGCGC
GAACGCGGCG CGGACATTCT CATGCTTTCA GAGCACTTCC TGTGCAAATT CTGCCGCAGC
AAAGGACGCA CGGCTCTCCG GCTGGACGAC GGCATCCGGC GCATTCTGGC GGCCTACCCG
TGGCCGGGCA ACGTGCGTGA GCTGGAAAAC TTCATGGAGC GGCTGAGCAT ACTGTGCGAC
GAAGACAGCG TGCGCCCCCA CGACCTGCCC CGCAAAATTC TGGACGCAGT GGGAGATGTG
GCACAGCTGC CCGAAGTGCC CGAACCGGCC CCCGCGCCGG CACCGCAAGG CTTTGCGTGG
CCGCGCATCG AAGACATGCA GCAGCGCGGG ATGGACCTGA AACAGTTCAT AGACACCGTG
GAGGAACGCC TGCTGCTGGA AGCACTGGAA AAAGCGGACG GCGTCAAAAA TCAGGCCGCT
GAAATACTGG GGGTAAAGCG GACAACCCTC ATCGAAAAAT TGAAAAAACG TCAGCTGGAC
AAATAA
 
Protein sequence
MELKTAGIIG QSSSLRDLFR VLAKVAPTDS TVLVTGESGT GKELLVRALH MNSQRADKPF 
VPINCGAIPR ELLESELFGH EKGAFTHAIR TRPGRFEVAD GGTIFLDEIG EMDLTLQVKI
LRVLQEKEIE RVGATATRKV DVRIVAATNR DLETEVREGR FREDLYYRLN VIPLHLPPLR
ERGADILMLS EHFLCKFCRS KGRTALRLDD GIRRILAAYP WPGNVRELEN FMERLSILCD
EDSVRPHDLP RKILDAVGDV AQLPEVPEPA PAPAPQGFAW PRIEDMQQRG MDLKQFIDTV
EERLLLEALE KADGVKNQAA EILGVKRTTL IEKLKKRQLD K