| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2951 |
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| Symbol | |
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| ID | 3757956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2930891 |
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| End bp | 2932747 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637783852 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_389440 |
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| Protein GI | 78357991 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACAG AAAATCAATC CACTGCGTGT TCCGTCCGCT TTGAAGTGCC GGAACCAACG
GCAACCCTGC TGTCGCTGCT TGCGGATGAT GCCGCAAAAG GCAGCGGACT GGCCTATGCA
CGGTCTGTGC TCGGACCGCT CACAGGATGG GATATACGGC AGCTGCCTGC CGCACTGCAT
GCCGCACTGG CAGAAGCGGA TGCGCTCGCA CCGTTGCAGG TGTGGCTGCG CTCGGACCGC
ACGCAGCCTT TTGCGTGCAT GTTCAGCCAC GGCGGTGCAA CCTTCCGCCT GAATGTTCAC
TGCCGCAGCA TAACAGCGGG AGAAAAAGCC CTGCAGACTG CGGTTGCAAC CTGCGAACCG
GCCGAAAACC GTCTGCCGCA GACCGACACA CCCGGAACCA TACCGCCTCT GCTTGACCGC
TTTCCGGCCT TTGTCGCACT TATCGGACAG GATTACACCG TCCGTTACGC CAACCGCACC
TTCCGCGAAA TGTTCGGCGA CGACGCATAC GGTCCCTGCT ACCGGTGCAT TCACGGCCGC
CAAAGCCCCT GCGACGTATG CGCGCCGTTC GATGTATTTG AAACAGATTC CCTGACCATA
TCGGAGTGGG AGCACCAGCC CACGGGCAAG GCATTCAGAA CTTTCGCCTA TCCTTTTGCA
CTGGATGACG GCAGCACATG CGTGCTTGTC ATAGGGCTTG ATATCTCGCA AAGCCTCAAG
GCGCAGAAGG CGCTTATCCA CAGCGAACAG CGCTACAGAG CCATAACCGA CAACCTTGCC
ACCGGCATAG CCGTTGTGGA TGCCAACGGA TGCATTCAGG CGGTGAACCC CAAAATCACC
GAATGGTTCG GCAGCACCAT TTCCGGCGGT GTGTTTGTGG ATGATCTCTT CAGCCTTATA
CGCAGCGCGG CACCGCCGGT GCCGCAGCAA AGCCCTCCCG CCGGCACCGG CGCCGCACAG
TCGCTGCTGC TTGCCATTCT TTCCGGAGCA ACATGGGAAA CGGAACTGCC CCTGAAAAGT
CTTTCCGGTG AACGCACATT CCGCATTGTG GTCTGCCCTG TGCTGGATTC TGAAGACATG
GCGGGAACAT CCGTACTTAT GCTGGATGAC GTGACCGAAA GGCGTCAGGC GGAACAGAGC
CTGCAGCGCA CACGCAAGCT TGAGGCCATG GGAACACTGG CCGGCGGCAT AGCCCACGAA
ATCAACCAGC CGCTCAACGC GTTGCAGCTG TATGCCAGCG GGCTGGAGAT GATGCTTGAA
AAACACGGTT CCATTGAACC GGACGTGCTG TACAAACGTC TTTCGTGGAT TCTGCGCGAG
GCAGGCAAAA TACGTGAAAT AATCGCCCAC ATGCGCGCCG TGGTCATGCA GGAGGAAACC
CCGCACTGCG GTCCGGTGAT GGTGGAAGAA GCCGTGCGCA GCGCGCTGGG GCTGGTAGGC
GCGCAACTGC AGTCACACGG CATCACCCTG CAGCTGGATT TCGGCAATGC CGTACAGCTG
GAACAGGTGG TCATCAATCT GGTGGTCAAC GCCATGCACG CGCTGGACTC TGTTGACATT
GCAGAAAAAA CCATCACCAT ACACACCGCT GCCGCTCCCA AAGGGATGGC CATGCTGGTG
GTGGAAGACA ACGGCCCCGG TCTGAACGGA CTGCAGGAAC GTATTTTCGA CCCTTTTTTC
ACCACCAAGG AAACCGGCAG CGGCATGGGG CTGGGGCTTT CCATTGTACA TGCTTTCATA
GAAACGTGGG GCGGGTCGGT GCACGCCGGC GACAGACCGC CGCCGGAGCG GGGAGCCCGC
TTTGTCATAC TGCTGCAACC CGCCGGAGAC TGTCATGCGC ATAATGATAA TAGATGA
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| Protein sequence | MHTENQSTAC SVRFEVPEPT ATLLSLLADD AAKGSGLAYA RSVLGPLTGW DIRQLPAALH
AALAEADALA PLQVWLRSDR TQPFACMFSH GGATFRLNVH CRSITAGEKA LQTAVATCEP
AENRLPQTDT PGTIPPLLDR FPAFVALIGQ DYTVRYANRT FREMFGDDAY GPCYRCIHGR
QSPCDVCAPF DVFETDSLTI SEWEHQPTGK AFRTFAYPFA LDDGSTCVLV IGLDISQSLK
AQKALIHSEQ RYRAITDNLA TGIAVVDANG CIQAVNPKIT EWFGSTISGG VFVDDLFSLI
RSAAPPVPQQ SPPAGTGAAQ SLLLAILSGA TWETELPLKS LSGERTFRIV VCPVLDSEDM
AGTSVLMLDD VTERRQAEQS LQRTRKLEAM GTLAGGIAHE INQPLNALQL YASGLEMMLE
KHGSIEPDVL YKRLSWILRE AGKIREIIAH MRAVVMQEET PHCGPVMVEE AVRSALGLVG
AQLQSHGITL QLDFGNAVQL EQVVINLVVN AMHALDSVDI AEKTITIHTA AAPKGMAMLV
VEDNGPGLNG LQERIFDPFF TTKETGSGMG LGLSIVHAFI ETWGGSVHAG DRPPPERGAR
FVILLQPAGD CHAHNDNR
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