| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2947 |
|---|
| Symbol | |
|---|
| ID | 3757952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2926563 |
|---|
| End bp | 2927411 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637783848 |
|---|
| Product | HflC protein |
|---|
| Protein accession | YP_389436 |
|---|
| Protein GI | 78357987 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01932] HflC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AAACCGTTCC GGCACTGCTC GCGGCCCTTA TTGTCATAGT GGCTGCCGTG
CAGTCTTTGT ACACCGTGCA CCAGACAGAA AAAGCCATAG TGCTGCAGCT GGGTGAACCG
GTAGGCGAAG TGATGGGACC GGGCCTGCAT GTAAAGATGC CGTTCATCCA GAACATCATC
TATCTTGACG CCCGGATACT GGAATATGAT GCCAATCCGG CAGAAGTGCT GACCAGCGAC
AAAAAAGCGC TGCTGCTTGA CAATTACGCC CGCTGGCGCA TTACCGACCC GCTGCTGTTC
TACCGTACCG TGCGCACCAT ACGCAGTGCG CAGGCACGTC TTGACGATAT AGTCTATTCG
CAGATGCGAG TCTTTCTGGG TCGCTATCCG CTGAGCGAAG TCATTTCGTC CAAACGCTCC
GTAATCATGG AAGAAGTGAC CAAACGGTCT TCGGAACTGC TGAAGGATTA CGGCATGGAA
GTGGTGGATG TGCGCATAAA ACGCGCTGAC CTGCCGCCGG AAAACCAGCG GGCCATTTTC
GGCCGCATGC GGGCCGAACG CGAACGTCAG GCCAAGCAGT ACCGGTCCGA AGGGCAGGAA
GAAGCCACCA AAATACGGTC GCTGGCCGAC CGCGAGCGTG CCGTCATGCT GGCCGAAGCA
CGGCGCTCCG CCGAAGTTAT CAAAGGCGAT GGCGAAGCGG AAGCCACACG CGTATATGCC
GCAGCGCTGC AGCAGGCGCC GGAATTCTAC GCATTCAAGC GCAGTCTGGA AGCATATGAA
AAAAGCCTGA AAGGCAAAAC GCGTATCATC ATGTCTTCTG ACGAAGACTT CTTCAACTAT
CTGCAGTAA
|
|---|
| Protein sequence | MSKKTVPALL AALIVIVAAV QSLYTVHQTE KAIVLQLGEP VGEVMGPGLH VKMPFIQNII
YLDARILEYD ANPAEVLTSD KKALLLDNYA RWRITDPLLF YRTVRTIRSA QARLDDIVYS
QMRVFLGRYP LSEVISSKRS VIMEEVTKRS SELLKDYGME VVDVRIKRAD LPPENQRAIF
GRMRAERERQ AKQYRSEGQE EATKIRSLAD RERAVMLAEA RRSAEVIKGD GEAEATRVYA
AALQQAPEFY AFKRSLEAYE KSLKGKTRII MSSDEDFFNY LQ
|
|---|
| |