Gene Dde_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2930 
Symbol 
ID3757935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2910431 
End bp2910988 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID637783831 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_389419 
Protein GI78357970 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTCA TCCGGACAGA ATTTCCGGGG CTGACATGTA TCCGTCCACG GGTTTTTCAT 
GACAGCAGAG GCTTTTTTCT GGAATCATTC CGGGCACGCC TTTTTGCAGA ACAGGGCCTG 
CCGGAAGAGT TTGTACAGGA CAATCATGCC TGTTCTGCAC AGGCAGGCGT GGTGCGCGGG 
CTGCACATGC AGCTGCCGCC CGCGGCGCAG GGCAAACTGG TATGGGTGAC GCGGGGCAGC 
GTGTTTGATG TGGCGCTGGA CCTGCGCACG GGATCACCCA CATACGGTAA AGCCTACACA 
GCGGTGCTCA GTGCCGCAAA CTTTCTGCGC CTGTTCATTC CCCGGGGCTT CGCGCACGGC 
TACATGACAC TGGAACCCCA CACCGAGTTC CAGTACAAAG TCGATGCCTA TTACGCTCCG 
CAGGCAGAAG CCGGAATACG CTGGGACGAT CCGGACCTTG ATATCCCGTG GCCGGACATG 
GAAGCGGTGC TGTCTCCCAA GGATGCGGAG CTGCCCCGCC TGTGCGATTT CGCCTCCCCT 
TTTGTCTATG TTCCCTGA
 
Protein sequence
MEFIRTEFPG LTCIRPRVFH DSRGFFLESF RARLFAEQGL PEEFVQDNHA CSAQAGVVRG 
LHMQLPPAAQ GKLVWVTRGS VFDVALDLRT GSPTYGKAYT AVLSAANFLR LFIPRGFAHG 
YMTLEPHTEF QYKVDAYYAP QAEAGIRWDD PDLDIPWPDM EAVLSPKDAE LPRLCDFASP 
FVYVP