| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2920 |
|---|
| Symbol | |
|---|
| ID | 3757924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2898411 |
|---|
| End bp | 2900054 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637783820 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_389409 |
|---|
| Protein GI | 78357960 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0347292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCA GCACCAGACA CAGACACATC CTGCGTTCGT TACCGCTGTT AGCTTCAGCA
CTGGGCAGAC GATACGGCGT CACCATACGC ATCGGTGGCA CAGAAGCTTA TACGGACGGA
AACGTCATTC AGCTTCCTGC ACTTCCGGTA CAATATGATG AGTCATTTAT AAATCTTGTA
AGGGGGTACA CTGACCACGA AGCCGCACAT ATCCGACATA CGGACTTTGA CGTACTGAAA
AGAGCGCAAA GCCCGCTGGA ACGACATGTG TTTAATATTC TGGAAGATTG GCGTGTAGAG
AACGCCATGT CCACAATCTA CCCGGGAAGC CGGAGAAACT TCCGGTGGTT GATCAGGTAT
CACTTCCTCA ATCCGGATCG GGAACCGGGA AATGATAAAG GCACGCTTGT GCTTGACTGG
CTGCTGCTGA CGGTACGCAG TTGGGATGAA CCAGATCTGC ATAGTCGCTG CCGGAAGCTG
GGCGCGATGA TGGATATCGG CTGGCCCTGG CTGCGTCTGC ACATTGAGGC GATCCTGCAT
ACCATGCAAG GGCATTGTCC GGATTCCCGG AGTTGCCTGC AGTATGCCCG CCAGGTGATT
GATTTGCTGA AGCGTGCCTC ATGTGAATGT GGCTCAACTG AGGAAGTGCC ACCCAGTGCG
CCCAATAAAA ACAAGCAGGC TGCATCCTCT TCCCTGGACT GCGCACCGTC TGAAAGGTCA
GCTTCACACG GGGCTCAATC AGGGCCCCCG TTTTCTTCAG ATGCACATTA TGCCGAGGTG
CTACAGAAGC TTCTACGCGC ATCCGAAGAC AACCTCCCTG AGGATATGTC CGGTGTGACC
GGAAGAAGCA TTGCCGCTTC TGTGCAGAAC ACTCCGGATT CAGCAACACT TGTAGTTGCA
CAGGAAGGTG CAAAGACCAT AACAAAACTG GCTCCTGACG CATTATGGGA AGCGGAGCAG
GCCACTGCCG GTATGCGGGC TCGTTTTCAC GGTCTGTTAC AAGCTGCGCA CTTTGTACGT
GGGAGCAATG CCCGTCGAGG CAGGCTCGAT ACGCATGCTC TGCATCGGAC AGCAGTTGAC
GATCCGCGCA TCTTTCTGCG GCAGATCCAG CGGCCCGGAA TTAATACGGC GGTGCATATC
CTGATGGATT GCTCCGGCTC CATGCGTAAA CGCATTCATC TTGCGTCTCA GGCAACGTAT
GCTGTTGCGA AAGCTCTGGA CCACACCGGT ATCAACATCG GCGTTACGGC TTTTCCGGCA
ACATACCAGA AGCAGATCGG ATGGGCGTCT GTCAGGCCGC TTATCCGTCA TGGGGAAAGG
ATGCATACTG AGTTCAGCCT GGCAAGCGGA GGGTCCACCC CTCTGGGGCC AGCGCTATGG
TGGGTAATGC AGCAAATGCT TCCTCTACAG GAAAGCCGGA AAATAGTCCT GATAATAACG
GACGGCGACC CCGATTGCTC CAGTGCCGCA AAGGAAGCTA TTGCAGCTGC ACAAAAAACG
GAGATTGAGC TATACGGCAT CGGTATCATG TCATCTTCGA TTACCGAACT GATTCCCCGT
AAGAGTCAGG TCATATGGAC CCTACCCGGG CTTGCACCTG CCATGCTTTC CATACTCAAG
CAAGCTCTGC TTCCCACTTC ATAA
|
|---|
| Protein sequence | MTTSTRHRHI LRSLPLLASA LGRRYGVTIR IGGTEAYTDG NVIQLPALPV QYDESFINLV
RGYTDHEAAH IRHTDFDVLK RAQSPLERHV FNILEDWRVE NAMSTIYPGS RRNFRWLIRY
HFLNPDREPG NDKGTLVLDW LLLTVRSWDE PDLHSRCRKL GAMMDIGWPW LRLHIEAILH
TMQGHCPDSR SCLQYARQVI DLLKRASCEC GSTEEVPPSA PNKNKQAASS SLDCAPSERS
ASHGAQSGPP FSSDAHYAEV LQKLLRASED NLPEDMSGVT GRSIAASVQN TPDSATLVVA
QEGAKTITKL APDALWEAEQ ATAGMRARFH GLLQAAHFVR GSNARRGRLD THALHRTAVD
DPRIFLRQIQ RPGINTAVHI LMDCSGSMRK RIHLASQATY AVAKALDHTG INIGVTAFPA
TYQKQIGWAS VRPLIRHGER MHTEFSLASG GSTPLGPALW WVMQQMLPLQ ESRKIVLIIT
DGDPDCSSAA KEAIAAAQKT EIELYGIGIM SSSITELIPR KSQVIWTLPG LAPAMLSILK
QALLPTS
|
|---|
| |