Gene Dde_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2920 
Symbol 
ID3757924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2898411 
End bp2900054 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content54% 
IMG OID637783820 
Productvon Willebrand factor, type A 
Protein accessionYP_389409 
Protein GI78357960 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0347292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCA GCACCAGACA CAGACACATC CTGCGTTCGT TACCGCTGTT AGCTTCAGCA 
CTGGGCAGAC GATACGGCGT CACCATACGC ATCGGTGGCA CAGAAGCTTA TACGGACGGA
AACGTCATTC AGCTTCCTGC ACTTCCGGTA CAATATGATG AGTCATTTAT AAATCTTGTA
AGGGGGTACA CTGACCACGA AGCCGCACAT ATCCGACATA CGGACTTTGA CGTACTGAAA
AGAGCGCAAA GCCCGCTGGA ACGACATGTG TTTAATATTC TGGAAGATTG GCGTGTAGAG
AACGCCATGT CCACAATCTA CCCGGGAAGC CGGAGAAACT TCCGGTGGTT GATCAGGTAT
CACTTCCTCA ATCCGGATCG GGAACCGGGA AATGATAAAG GCACGCTTGT GCTTGACTGG
CTGCTGCTGA CGGTACGCAG TTGGGATGAA CCAGATCTGC ATAGTCGCTG CCGGAAGCTG
GGCGCGATGA TGGATATCGG CTGGCCCTGG CTGCGTCTGC ACATTGAGGC GATCCTGCAT
ACCATGCAAG GGCATTGTCC GGATTCCCGG AGTTGCCTGC AGTATGCCCG CCAGGTGATT
GATTTGCTGA AGCGTGCCTC ATGTGAATGT GGCTCAACTG AGGAAGTGCC ACCCAGTGCG
CCCAATAAAA ACAAGCAGGC TGCATCCTCT TCCCTGGACT GCGCACCGTC TGAAAGGTCA
GCTTCACACG GGGCTCAATC AGGGCCCCCG TTTTCTTCAG ATGCACATTA TGCCGAGGTG
CTACAGAAGC TTCTACGCGC ATCCGAAGAC AACCTCCCTG AGGATATGTC CGGTGTGACC
GGAAGAAGCA TTGCCGCTTC TGTGCAGAAC ACTCCGGATT CAGCAACACT TGTAGTTGCA
CAGGAAGGTG CAAAGACCAT AACAAAACTG GCTCCTGACG CATTATGGGA AGCGGAGCAG
GCCACTGCCG GTATGCGGGC TCGTTTTCAC GGTCTGTTAC AAGCTGCGCA CTTTGTACGT
GGGAGCAATG CCCGTCGAGG CAGGCTCGAT ACGCATGCTC TGCATCGGAC AGCAGTTGAC
GATCCGCGCA TCTTTCTGCG GCAGATCCAG CGGCCCGGAA TTAATACGGC GGTGCATATC
CTGATGGATT GCTCCGGCTC CATGCGTAAA CGCATTCATC TTGCGTCTCA GGCAACGTAT
GCTGTTGCGA AAGCTCTGGA CCACACCGGT ATCAACATCG GCGTTACGGC TTTTCCGGCA
ACATACCAGA AGCAGATCGG ATGGGCGTCT GTCAGGCCGC TTATCCGTCA TGGGGAAAGG
ATGCATACTG AGTTCAGCCT GGCAAGCGGA GGGTCCACCC CTCTGGGGCC AGCGCTATGG
TGGGTAATGC AGCAAATGCT TCCTCTACAG GAAAGCCGGA AAATAGTCCT GATAATAACG
GACGGCGACC CCGATTGCTC CAGTGCCGCA AAGGAAGCTA TTGCAGCTGC ACAAAAAACG
GAGATTGAGC TATACGGCAT CGGTATCATG TCATCTTCGA TTACCGAACT GATTCCCCGT
AAGAGTCAGG TCATATGGAC CCTACCCGGG CTTGCACCTG CCATGCTTTC CATACTCAAG
CAAGCTCTGC TTCCCACTTC ATAA
 
Protein sequence
MTTSTRHRHI LRSLPLLASA LGRRYGVTIR IGGTEAYTDG NVIQLPALPV QYDESFINLV 
RGYTDHEAAH IRHTDFDVLK RAQSPLERHV FNILEDWRVE NAMSTIYPGS RRNFRWLIRY
HFLNPDREPG NDKGTLVLDW LLLTVRSWDE PDLHSRCRKL GAMMDIGWPW LRLHIEAILH
TMQGHCPDSR SCLQYARQVI DLLKRASCEC GSTEEVPPSA PNKNKQAASS SLDCAPSERS
ASHGAQSGPP FSSDAHYAEV LQKLLRASED NLPEDMSGVT GRSIAASVQN TPDSATLVVA
QEGAKTITKL APDALWEAEQ ATAGMRARFH GLLQAAHFVR GSNARRGRLD THALHRTAVD
DPRIFLRQIQ RPGINTAVHI LMDCSGSMRK RIHLASQATY AVAKALDHTG INIGVTAFPA
TYQKQIGWAS VRPLIRHGER MHTEFSLASG GSTPLGPALW WVMQQMLPLQ ESRKIVLIIT
DGDPDCSSAA KEAIAAAQKT EIELYGIGIM SSSITELIPR KSQVIWTLPG LAPAMLSILK
QALLPTS