Gene Dde_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2901 
Symbol 
ID3757905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp2888968 
End bp2890053 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content47% 
IMG OID637783802 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_389391 
Protein GI78357942 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.211748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CGTTGATTAG CGGGATTACC GGGCAGGATG GAGCCTATCT GGCAGAATTT 
TTACTGCAAA AAGGCTACGA AGTGCATGGT ATCAAGCGCC GTGCGTCTTT GTTTAATACA 
GACCGTATTG ATCATTTATA CGAAGACCCA CATGCAGAGA ACCGTAAATT TATTTTGCAT 
TATGGCGACC TGAGTGATTC GACAAATCTC ATCAGAATTA TTCAGGAAGT GCAGCCTGAC 
GAAATTTATA ATCTTGCTGC ACAAAGCCAT GTACAGGTTT CCTTTGATTC GCCGGAGTAC 
ACCGCTAACG TAGATGCTTT GGGCACGCTT CGCATTCTGG AAGCTATCCG TATTCTGGGT 
TTAGAAAAGA AAACTCGCTT TTATCAGGCG TCAACTTCGG AGCTGTTCGG TCAGGTGCAG 
GAAATTCCGC AGACCGAAAA AACTCCGTTC TATCCGCGTT CCCCTTATGC CTGTGCAAAA 
TTGTATGCGT ATTGGATTTG CGTAAACTAT CGTGAAGCCT ACGGCATGTA TGCCTGCAAT 
GGGATTTTGT TTAACCATGA GTCTCCCATT CGTGGCGAAA CTTTTGTGAC GCGTAAAATT 
ACCAGAGCAC TGGCGCGCAT CAAGCTCGGC CTGCAAGATA GGCTTTATCT TGGGAATATG 
AATGCATTAC GCGACTGGGG CCACGCAAAA GACTATGTTG AGATGCAGTG GTTGATGCTC 
CAACAGGATG CACCGCAAGA TTTTGTTATT GCAACTGGTG AACAGCATTC AGTACGTGAA 
TTTGTTGAGC TGGCAGCTAC AGAACTGGGC ATTTCCATTG AATGGCGTGG CTACGGCGAA 
GAAGAAAAAG GCTACGATAC GGCGACAGGC AAGTGTATCG TTGCGGTGGA TAAAAAATAC 
TATCGTCCCA CAGAAGTGGA AACGTTGCTC GGTGATCCTG CCAAGGCCAA AAAAGAACTT 
GGGTGGGTGC CGCGCACCAC TTTTACCGAA TTGGTTAAAG AAATGGTGCA GACGGACTTC 
CGAGAAGCAG AGCGAGAAAT CTTGTGTACC GAGCACGGGT TCCCGGTCTG CCAGCCGCAG 
GAGTAA
 
Protein sequence
MKKALISGIT GQDGAYLAEF LLQKGYEVHG IKRRASLFNT DRIDHLYEDP HAENRKFILH 
YGDLSDSTNL IRIIQEVQPD EIYNLAAQSH VQVSFDSPEY TANVDALGTL RILEAIRILG 
LEKKTRFYQA STSELFGQVQ EIPQTEKTPF YPRSPYACAK LYAYWICVNY REAYGMYACN 
GILFNHESPI RGETFVTRKI TRALARIKLG LQDRLYLGNM NALRDWGHAK DYVEMQWLML 
QQDAPQDFVI ATGEQHSVRE FVELAATELG ISIEWRGYGE EEKGYDTATG KCIVAVDKKY 
YRPTEVETLL GDPAKAKKEL GWVPRTTFTE LVKEMVQTDF REAEREILCT EHGFPVCQPQ 
E