Gene Dde_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2900 
Symbol 
ID3757904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2888030 
End bp2888965 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content50% 
IMG OID637783801 
ProductGDP-fucose synthetase NAD dependent epimerase/dehydratase 
Protein accessionYP_389390 
Protein GI78357941 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGT CACCAGAAAG CTTGATTTAT GTCGCAGGAC ATGGCGGTCT TGTGGGGGCT 
GCTATAGTCA GGCGACTACA GGCAGAAGGT TGCCAGAATC TTCTGCTGCG CCGAAGCCGC
GAATTGGATT TGCGCAATCA GCAAGCTGTG GACGACTTTT TTGCGACGTA TCGTCCTGAA
TATGTGTTTC TTGCAGCCGC AAAAGTGGGC GGGATTCATG CAAATAGCAC GTATCCTGCT
GACTTCATTC GCGATAACTT GCAAATCCAG ACCAATGTCA TTGATGCAGC ATACCGCAAT
GGTACCCAGA AGCTACTCTT TTTGGGGTCA TCATGCATTT ATCCAAAGTT TGCACCGCAG
CCCATGCCCG AGGATTGCCT GCTCACCAGT GCATTGGAGC CGACTAATGA GTGCTACGCT
CTTGCAAAAA TAGCAGGCAT CAAAATGTGC CAAGCCTATC GGAAGCAGTA TGGCTTTGAT
GCGATTAGCG CAATGCCCAC AAACTTGTAT GGACCGGGTG ACAATTACCA CCCTGAAAAC
AGCCACGTCA TTCCTGCCCT GATCCGACGG TTTCATGAAG CAAAGGTGCA AGGGCTTCCC
CAAGTGACCA TATGGGGAAC AGGCGCGCCA CGGCGGGAGT TTCTCTATTC CGACGATCTC
GGAGACGCGC TGGTCTTTCT TATGAAAAAT TATTCGGACA TAGAGCATGT GAACGTGGGG
TACGGTGAAG ACGTTACAAT TAAAGAGTTA GCAGGGCTTG TAGCAAAGGT TGTGGGATAT
GCTGGTGAAA TTTTGACTGA TCCCTCAATG CCTGATGGAA CACCTCGGAA ACTTCTGGAT
TGTACGAAGC TATTCTCTAT GGGGTGGCGC CCTCATGTGC AGCTTGCAGA AGGATTAGAC
TTTGCTTATC GCGATTTTAC GGCAGTTCTG CCATAA
 
Protein sequence
MTLSPESLIY VAGHGGLVGA AIVRRLQAEG CQNLLLRRSR ELDLRNQQAV DDFFATYRPE 
YVFLAAAKVG GIHANSTYPA DFIRDNLQIQ TNVIDAAYRN GTQKLLFLGS SCIYPKFAPQ
PMPEDCLLTS ALEPTNECYA LAKIAGIKMC QAYRKQYGFD AISAMPTNLY GPGDNYHPEN
SHVIPALIRR FHEAKVQGLP QVTIWGTGAP RREFLYSDDL GDALVFLMKN YSDIEHVNVG
YGEDVTIKEL AGLVAKVVGY AGEILTDPSM PDGTPRKLLD CTKLFSMGWR PHVQLAEGLD
FAYRDFTAVL P