| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2870 |
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| Symbol | |
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| ID | 3758831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2857941 |
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| End bp | 2861198 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637783771 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_389360 |
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| Protein GI | 78357911 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.737132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCAT CCGCCCATCA GGAAAAACAC TTCCAGCAAT ACATCATTGA CCGGCTGGTA
GAGCAGGGCT GGAAGCTAGG CGACACCCAG CACTACGACA ACGAACGGGC GATGTATCCC
GAAGACCTGG AAAGCTGGAT CAAGACCAGC GGCCAGCAGG AAAAGTGGGA CAAGCTGGAA
CGGCTTAACG GGGCCAAGAC CCTTGAGGTG CTGATGGCGC GGCTGGACAA GGCGCTGGAA
AAGCAAGGCA CCATGCAGGT GCTGCGCCAG GGCTTTTCCA TTGCCGGTTG TGGCCTGATC
GAGATGACCG AGGCCGCACC GGAAGACAAG CGCAATGCAG CAGTCATTGA GCGCTACCAG
GCCAATATCC TGCGCGTGGT GCCGGAGCTG AAGTATCACC CAGCCCGTGA ATTTGCCATT
GATCTGGTGC TGTTTATCAA CGGCCTTCCC GTGGCGACCG TGGAGCTTAA AACCGACTTC
ACCCAGTCGG CTGAAGCGGC GATGGATCAA TACCGAAATG ACCGTTTGCC CTACGATCCC
AAGACCAAGC GCAGAGAACC GCTACTGACA TTCAAGCGCG GGGCGGTGGT GCACTTTGCC
ATGTCTGATT CCGAAATCAT GATGGCAACC AAGCTGGACG GGGAAAGTAC CTTCTTCCTA
CCGTTCAACA AGGGTCGCAA GGACGAAAGC GGCGCGGTAC ATGCGGGTAA CCCGCCTGGT
GAGATCAAGG CCGATGGTAC CCAAGAATAC CCGGTAGCCT ACTTCTGGGA GGCGGTCTGT
CAGCCGGACT CTTGGCTACG GATTTTCCAT AGCTTTGTCT ACGTCGAGAC AAAGGACGTA
GTAGATATTC AGGGCAACTG GTCAAAGAAA GAGACCCTGA TTTTCCCGCG ATTCCACCAG
TGGACGGCAG TGAACCAGAT ACTGGCCGAC GCTCGCCAGA ACGGTGCGGG CATGACCTAC
CTATGCGACC ACAGCGCCGG TTCCGGCAAA ACCAGCACCA TTTCCTGGAC GGCCCATGAT
CTGGTGAAGC TGCGCGAAGA CAACGGCGAC GCGGTATTCA ACAGCGTGAT TATTGTCACC
GACCGCAATG TGCTGGACGG CCAGCTCCAG GATGCGGTGA AGCAGATTGA CCACCAGTTT
GGCGTGATCG CCGCCATCGA CCGGCAGAAA TCGTCCAAGT CCAAGAGCAA GCAGCTTTCG
GAAGCTCTGT TGTCTGGAAC ACCGATTGTG GTGGTCACGA TTCAGACCTT CCCCTATGCG
ATGGAAGCCA TCATCACCGA CAAAGCCCTG AAAGGGAAAA ACTTTGCGGT GATCATTGAT
GAGGCGCATA ACTCGCAGAC CGGCGCTACC GCCGCCAAGC TGCAAGCCGC ACTGGGAATG
AGCGGGCAAG GCAAGATGTC CACCATGACG GTGGATGAGT TGCTGGAACA ACTGCAAAAG
TCCCGCGCCC GACCAAAGAA TATCAGCTAC TTCGCCTTTA CCGGTACGCC GAAGCACTCC
ACGTTGATGC TGTTCGGTCG CCCGACCGAT CCAAGCCAAC CGGCCTCGGA CGATAACCCG
CCGCAAGCCT TCCACCTGTA CACCATGCGC CAGGCCATCG AGGAGAAGTT CATTCTCGAT
GTGCTGAAAG GCTATGTGCC CTACAAAACG GCCTTCAACC TTTCCAAGCA GATTGAAGAC
AGCAAGCGGG TGAGCGGCAA GGCCGCCAAA CGCGCCTTGG CACAGTGGAT GTCCCTGCAC
CCCACCAATG TGACCCAAAA GGTGCAGTTT ATCGTTGAGC ACTTCACCAA GAACGTCGCC
CACCGGCTGG ATGGCAAGGC CAAGGCCATG GTGGTCACCA GCTCCCGTGC CGCCGCCATT
CGCTACAAGA AGGCGTTTGA CCGCTATATC GAGCAGCACA GCGAGTACGG CTTTATTCAT
TCACTGGTGG CCTTCTCCGG CAAGATGACC GGTAAGCAGG TGATGCACCA GGATGACGGT
GAGTTTAAGG ACGATGTGTT TATCGTCGAT GAGAACGAGG AGTTCACCGA GCAGAGCATG
AACCCGGATA TCCACGGGCA GGATTTGCGT TTTGCCTTTG ACCGCCCTGA ATACCGGGTG
ATGTTGGTGG CTGACAAGTT CCAGACTGGC TTTGATCAAC CCAAACTGGT CGCCATGTAT
GTAGACAAGA AAATCGCTAA CCATGTGGAG ATTGTGCAGA CCTTCTCCCG TCTCAACCGG
ACGGCGCCCG GTAAGGATGA GGTCTTTATC ATCGACTTTG TGAACGACCC GGAGAACGTG
CGTCAGGCCT TTACCACCTA TGACAAGGGT GCTCACATCG ACGAAGTGCA AGACCTCAAT
GTGGTCTACG AGATCAAGGA GCGCTTGGAC GAGCACGGCC TGTACGACGA GAAGGACTTG
GCTGCGTTCA AGGAAGCACG CTTCAAGACC ATCCGCGACA TCACCCATAC CAAATCGCCA
CAGCACAAGG CGCTGTATGC CGCCACTGCT GGAGCGACGG CCTTGTATAA CGACAAGATG
AAGATGCTGC GCGATGGCAT GGCGACCTGG GAGGCGGCTT TTGAGAAGGC CCGCGCCAAG
GGTGATGAGG CGGGCATGAA GTCTGCTGAC CACCATCAGG ATGAGTACGC CGAGCAAATC
AAGGCACTGA TTGGCTTCAA GTCGGATTTG GGGCGTTTTT GTCGTACCTA CTCCTATATC
GCCCAACTGA TTGATTTTGG CGACCCGGAG CTGGAGAACT TCGCCGCCTT CGCCAAGCTA
TTGCAAAAGC GTCTATTGCA CGAAGCACCT GAAACCGTGG ACTTGACCGG CCTGGTGCTC
ACCGGTTTTG ACATCAATGC TCGTTCAGAT AACGCGGAGG ACGAAGGCGA AACCCCGGTA
CTGCAACCGG TAGGTGCAGG CGGTGGTGGT GTGGCGGGCG ACAAGCCGAA ATTCGTCAAA
GAGATTATTG AGCGACTCAA CAGCCTGTTT GGTGAGGCAA CGCCGATTCA GGATCAGGTG
GCCTTCGTGA ATCAGATCTT TTCAATCGCC GGCGAAAGCG ATGTGGTGAT GGCTCAGGTG
GAAAGTAACA CCCGCGAACA GGCCATGAAA GGCAATTTGC CCGGCGCTGT TCAGCAAGCG
GTGGTACGTG CTTTGTCCAG CCACCAGAAG CTGGCCACCC AGGTGCTCAA GTCTGATCGT
CAGGGCATGG CCGCACTGGT TGACGTAGTG TATGACCTGC TGCGCGAAGG CCAAAACATC
GACCTGGATA TGGATTAA
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| Protein sequence | MQASAHQEKH FQQYIIDRLV EQGWKLGDTQ HYDNERAMYP EDLESWIKTS GQQEKWDKLE
RLNGAKTLEV LMARLDKALE KQGTMQVLRQ GFSIAGCGLI EMTEAAPEDK RNAAVIERYQ
ANILRVVPEL KYHPAREFAI DLVLFINGLP VATVELKTDF TQSAEAAMDQ YRNDRLPYDP
KTKRREPLLT FKRGAVVHFA MSDSEIMMAT KLDGESTFFL PFNKGRKDES GAVHAGNPPG
EIKADGTQEY PVAYFWEAVC QPDSWLRIFH SFVYVETKDV VDIQGNWSKK ETLIFPRFHQ
WTAVNQILAD ARQNGAGMTY LCDHSAGSGK TSTISWTAHD LVKLREDNGD AVFNSVIIVT
DRNVLDGQLQ DAVKQIDHQF GVIAAIDRQK SSKSKSKQLS EALLSGTPIV VVTIQTFPYA
MEAIITDKAL KGKNFAVIID EAHNSQTGAT AAKLQAALGM SGQGKMSTMT VDELLEQLQK
SRARPKNISY FAFTGTPKHS TLMLFGRPTD PSQPASDDNP PQAFHLYTMR QAIEEKFILD
VLKGYVPYKT AFNLSKQIED SKRVSGKAAK RALAQWMSLH PTNVTQKVQF IVEHFTKNVA
HRLDGKAKAM VVTSSRAAAI RYKKAFDRYI EQHSEYGFIH SLVAFSGKMT GKQVMHQDDG
EFKDDVFIVD ENEEFTEQSM NPDIHGQDLR FAFDRPEYRV MLVADKFQTG FDQPKLVAMY
VDKKIANHVE IVQTFSRLNR TAPGKDEVFI IDFVNDPENV RQAFTTYDKG AHIDEVQDLN
VVYEIKERLD EHGLYDEKDL AAFKEARFKT IRDITHTKSP QHKALYAATA GATALYNDKM
KMLRDGMATW EAAFEKARAK GDEAGMKSAD HHQDEYAEQI KALIGFKSDL GRFCRTYSYI
AQLIDFGDPE LENFAAFAKL LQKRLLHEAP ETVDLTGLVL TGFDINARSD NAEDEGETPV
LQPVGAGGGG VAGDKPKFVK EIIERLNSLF GEATPIQDQV AFVNQIFSIA GESDVVMAQV
ESNTREQAMK GNLPGAVQQA VVRALSSHQK LATQVLKSDR QGMAALVDVV YDLLREGQNI
DLDMD
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